rs107829322 SNP Detail

Summary

• ID
  rs107829322
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135437407 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAG AGAGAGAGAG AGAGAGAGAG
  A
  GAGAGAGCAC CAGGCCTACT CCAGG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss147549705	ENSMUSSNP3198294	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs107829322					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135437407 () rs orientation: forward

Symbol	Name	Function Class
Ifnlr1	interferon lambda receptor 1	1915 bp downstream
Rr602110	regulatory region 602110	216 bp distal
Rr602111	regulatory region 602111	1049 bp distal
Rr602112	regulatory region 602112	837 bp distal
Rr602113	regulatory region 602113	605 bp distal
Rr602114	regulatory region 602114	330 bp distal
Rr602115	regulatory region 602115	348 bp proximal