rs107826009 SNP Detail

Summary

• ID
  rs107826009
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:146825227 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AATGTATATC TCCAGTTTTA AAGCATTAGC AAAATATAAG
  AAAATTTGAG TGAAATCCAC TCTATGTATA TTAAATTAAA AGAATTTTTA ATTTTTTTTT
  A
  TAATCCTGGC TTTTAAAAAA ATGAAACAGT TAATGGGTTT AACAAGGGAG TGCTGCAGTT
  ACCCATGTAT GCCATCAGAG GACGCCAAAA CTGGCCGATG A                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147752418	ENSMUSSNP5145957	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs107826009					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:146825227 () rs orientation: forward

Symbol	Name	Function Class
Rr604450	regulatory region 604450	68 bp proximal
Rr604451	regulatory region 604451	291 bp proximal