rs107813157 SNP Detail

Summary

• ID
  rs107813157
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:58490309 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCGATAGAG TTCCTCTGTG
  CTTCTGCTGT GAGATCCTTG GGACGGTGGT TCTTAACATG TGATACCCCT GTGGGATCTG
  CAGACCCTTC CACAGGGGTC ACAAGTCACA GCTTTACATT TTGATGCACA GCACTAGCAA
  AATTACAGGT ATGAAGCCGC AACAAAAGAA ACTTTATGGT TGGGGGTCAG CACAACATGA
  R
  GAACTGTATT AAAGGGTCAG AGAACTAGGA AGGTTGAGAC TCGCTGCTTT AGGACAAAAC
  TCAAAGGTAT ACGAAACCCT GCTGTGTAGA GAAACCCTAA AGGAGCCTTG AATTCCACAG
  CCATAGACGG CCTCACAGGC CTTTAGATAA TTGGTCTTCA GCTGGTGGTG CTATTTTGGA
  GAGACTCTTA GGGACGTGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss146392621	ENSMUSSNP2141323	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
ss321138266	CHEV_4_58503181	CHEVERUD	SCREENING_POP	f	SNP			A		G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs107813157					SNP	A	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:58490309 () rs orientation: forward

Symbol	Name	Function Class
Lpar1	lysophosphatidic acid receptor 1	Intron
Rr592898	regulatory region 592898	147 bp proximal