rs107809113 SNP Detail

Summary

• ID
  rs107809113
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:92260010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTAATGATA CATGTAATGT
  AGAGGACAGA AATGATGTGA TTTCTCAGGC CACCAGTACT TGAGACTGCC TGCCTTAAAG
  GTGTTTGCTT GTGTAAACAG CATTACTTGT TTCTTTGGAA CAAAATAATT TCTCTTAAGA
  AAAGGTCTGA AACACAGTAG CCTTTCCCAA GGCTGTTGCA ACAGAGTGCT GACAGGAAAG
  G
  GGAAAGCCAA CCAGCTCTAA AATAGGAGTT GGGAAATAAT GTTGGTGTTC AGAGAGACAA
  ACCGATTTGA AGCTCCATAG TTCTATCTAT CTTCTCTGAA TTGATCACTA CTGATCATCT
  CTTTCATATC ATCTCTTTCA GATCCTGAGA ATTCAGCACT ATGTCTTACC AACAGCAGCA
  GTGCAAGCAG CCTTGCCAGC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135481044	ENSMUSSNP227854	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs107809113					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:92260010 () rs orientation: forward

Symbol	Name	Function Class
Sprr2e	small proline-rich protein 2E	Intron
Tssr30284	transcription start site region 30284	559 bp downstream