rs107775987 SNP Detail

Summary

• ID
  rs107775987
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:36849308 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCACTCAGGG GTTCATTTAG
  CCAGAGCACA GCCATCTTTC TTCCCCATCA GAACTTTTCT TCTCTTGCTG GCCCACTGCC
  TCCTTCCTCC ATGCCTCTAG AATTCCACCT GGAGCAGACT CAAACATCTG AGCAGGGACA
  CAGTTCAGGA AGCACCGGGC TCTGAGCAGA TGGATGTCCC ACCCAGTGTG TGTGTGTGTG
  K
  GGGGGGGGTC TCAACATTTT CCTTTTATGG GATACAGCAT TTTCTTACCC TTTTCCTGCA
  TGTTGGCAGA GAGTTTCTGG TCTTGATAAG TGATTTACTC ATGGGTTGTG TGTATTTTGC
  TCTTATCAGT TGTTATTTAG TGGGCTTTAA AATGTGATCT AGGGTGGGGA TGTAGCTCAG
  TTGGTAGAGG GCTTGTCTCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134790779	ENSMUSSNP3135263	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs107775987					SNP	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:36849308 () rs orientation: forward

Symbol	Name	Function Class
Rr575399	regulatory region 575399	1769 bp proximal