rs107773533 SNP Detail

Summary

• ID
  rs107773533
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:149087952 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G ATATTTAAAA GTTTTCTAAT TGACTTGCAG AGAAAGGCTG
  GGGAGATCTG CATCCTTCAT CTTTGTACAG AGAAGAAGGA AGGAAGCAGC CGCCAGGCTC
  M
  GCAAAGGCAA AGCCAATAGA GCAGGAAGCT GGTATTTAGT GCTATTTTGT CGGTAATGAT
  GCTTCAGTGT ATCAAAAGGG AATTCCTTCC TTTTATCCGA C                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss136070348	ENSMUSSNP6750594	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs107773533					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:149087952 () rs orientation: forward

Symbol	Name	Function Class
Gm30382	predicted gene, 30382	within coordinates
Gm64772	predicted gene, 64772	within coordinates
Rr587318	regulatory region 587318	1850 bp distal
Rr587319	regulatory region 587319	within coordinates