rs107756785 SNP Detail

Summary

• ID
  rs107756785
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:93122345 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTTTAGGG CGATTAAAAT
  CACCACTGAG ATTTTTAATG ATACATTTTA TTTATACAGC ACCCCGCATT TTTATAGCAT
  TCGCCTCCGG CAAGATCGGT GAATAATTTA GAATAAGGAG TAAAACCAGC CTTCCATAGA
  ATTCTCAAAA CCACATCTGC TGCCCATTTC CTAACCCTCC CTGTACCTGC TGTGAGAGCC
  S
  CCCCCACCCC ACCCCCGCAC ACCTTCAGCC TCAGTTTCCC AACAGGAAGA AGATTCCCAC
  TCGGTACAGC TTGCAGATGG TTATGTGCTG GCATTAGAGC AGCCTGAGTT ATCTGAGTTC
  TTTTTATGCT CTGGGCAGAG CTCAGAGCTC TGAGACATAA AAGAGAGCAA GATGGAAGGA
  CTGGCTACCT TTGGAGTCCA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146941220	ENSMUSSNP4394424	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs107756785					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:93122345 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr561147	regulatory region 561147			237 bp distal
Tspan18	tetraspanin 18			Intron
				Noncoding-Transcript-Variant