rs107742990 SNP Detail

Summary

• ID
  rs107742990
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:143333627 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTATCCCTGA AGCAAGGTGG CTGCCTAAAT GGGCCAAATC
  TAAGAAATCT TGGTTTAAAT GAGAGTGGAG AGCCATTGAA GATAGCCAGT GTCAACCTCT
  R
  GCCTCCACAT ATAGGCAGAA ACATATTGTT GAGCACCTGC ACATACATGT GCACACACAC
  ACACACACAC ACACACACAC ACACATTTAA CCAAACATA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147760653	ENSMUSSNP5039793	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs107742990					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:143333627 () rs orientation: forward

Symbol	Name	Function Class
Rr566292	regulatory region 566292	580 bp distal