rs107723621 SNP Detail

Summary

• ID
  rs107723621
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:20562551 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTTCACTC AAGGAACAAC
  CCTATCATGG GGTGGGGGGG GGGGGGGCGG GTGCGCTGTG TGTGCAGAGC TTACTGTATG
  TGTGCAGAGA CAAACAGCAG CAGAATGCCA AAAGGCTTCA GAGAGAGGCA TAGAGCCCTG
  CTTAGCAGAA GGGAAGAAGT GTTATTTGGC CTCCCAAGAC CATTTCGAGT CTGTTTTTCT
  R
  TTTCACATCC TCTTACATTA GGTCATCCTG CCTCCATTTC CAGCCTGGGT TGTCTGCCTA
  TCTCTTATTC CCCATCCCTA CCCCGTACAT CTCTTTCCTC TGTCCCATTT GACAGTCACC
  TTCTGGGGGA CAGTAAGAGG GAGGGGGATA GAGATTATAC CTGACTCTGC CTAGCACACA
  GTGTGCTCTC ATGCAGGGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss134672222	ENSMUSSNP68358	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs107723621					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:20562551 () rs orientation: forward

Symbol	Name	Function Class
Rr574081	regulatory region 574081	872 bp proximal
Rr574082	regulatory region 574082	1001 bp proximal