rs107701416 SNP Detail

Summary

• ID
  rs107701416
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:116946317 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTGCTTAA AAGAGCTGTA
  ACTCCAGGAT ACTCCCAGAA GGCCTTATTC CAGTCTTTTT TCTTGCCCCT TGCACTCACT
  CCGAATTGGA ACAGGATCCT GCTGAACTCC ATCTATTCTG GACTCTGCTT CCTCTTTTCA
  GTCTGGTGTG CATCGATGCC TAAGAGGGAG GAAGTGGAGG ACATGGAACC ACAGCGGACC
  C
  CAAAATGGAT ATCATATACT CCATGCAAGC AACATCTTTG TTGATTCTGC TTATTAGTTT
  CTTCCCAAGA GCAAATCTAG TATCTGACAT ACAAGTTGTC TTCGGTAAAT AGTCGTCATT
  CCGTTTGAAT GGCGTATATC ATAAAATCCT GTACAGTCTC TGGGTAAAAC ACAGATAATC
  ACCATTACAC GGGTTTAAAG                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss135685006	ENSMUSSNP6146109	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs107701416					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116946317 () rs orientation: forward

Symbol	Name	Function Class
Rr583834	regulatory region 583834	346 bp proximal
Rr583835	regulatory region 583835	444 bp proximal