rs107698114 SNP Detail

Summary

• ID
  rs107698114
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148379836 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTCTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGAG
  TGTGTGTGTG AGAGAGTGTG TGAGTGTGTG TGAGAGAGTG TGTGTGAGTG TGTGTGTGAG
  Y
  GGCCTAGCCA AAGCTGCTGC TGGCTGTACC TGAAAAATTA GTTTGATGAT TTTCCCCTCT
  TATTTTCTTT TCTCTCTCCT CCCTCTCTTC TTCTTTCTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss148000560	ENSMUSSNP3880933	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss321418935	CHEV_4_147669488	CHEVERUD	SCREENING_POP	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs107698114					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148379836 () rs orientation: forward

Symbol	Name	Function Class
Rr604648	regulatory region 604648	1641 bp distal