rs107697614 SNP Detail

Summary

• ID
  rs107697614
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153663253 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTACTTGAG TTTCAGGTTC
  CAGGTGTGCA CCACTGTGCC AGGTTCACGT TCTTTCAAAA GTAGTTTTAT TGAATCTGCG
  TTAATCAAAA ATTTATTATA AGAAATGTGC TCCTCCAATT CTGGAAACCA AAAAGGCCTG
  CAATTTGTTT CTGTCCAGCT TGAGACCCAG AAGAACCCAG GTGGAGCTCC AAGGGCTGAT
  R
  TTCCAGATCA ATGGACTGGG AGAATTCTGC TCACACTCAT GGTTGAATGA GACCCCTACC
  ACTGTATTAG GGAGGGCAGT CACCGTCATC CATGGTACCG ATGTACACAT TCATCTCACC
  CAGAAACACT CTCTTCAACC AGGCATGGTG GCACGTACCT GTAGTCCCAG CACTGAAGAG
  GCTGAGGTCA GCTGGAGCTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss136115415	ENSMUSSNP2583587	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs107697614					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153663253 () rs orientation: forward

Symbol	Name	Function Class
Rr398135	regulatory region 398135	372 bp upstream
Rr587804	regulatory region 587804	1792 bp proximal
Rr587805	regulatory region 587805	1969 bp proximal
Tssr32440	transcription start site region 32440	781 bp upstream