rs107692914 SNP Detail

Summary

• ID
  rs107692914
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:125507880 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATATGCTTTT TAGTTTGTGA ATCTTTCAAG TGCTGGAATT
  TAAATATTGC CTGTTAATTG TTCCACTCTT CTCTGCTGGT AGGATTATTT ATTTTCAATT
  M
  AAATTTACAT AGTTTTCTTA GAGTCCTTCA ATATCATCCT ACAATGATGG GGCACCATTG
  GACCATGCCC ATCGTTTGGA AGACTATGAA ACAGGCCAG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147484293	ENSMUSSNP4332145	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs107692914					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125507880 () rs orientation: forward

Symbol	Name	Function Class
D2Mit105	DNA segment, Chr 2, Massachusetts Institute of Technology 105	140 bp distal
Rr397269	regulatory region 397269	1362 bp upstream
Rr564256	regulatory region 564256	165 bp distal
Rr564257	regulatory region 564257	within coordinates
Rr564258	regulatory region 564258	1198 bp proximal
Rr564259	regulatory region 564259	1256 bp proximal
Rr564260	regulatory region 564260	1867 bp proximal
Shc4	SHC (Src homology 2 domain containing) family, member 4	Intron