rs107653519 SNP Detail

Summary

• ID
  rs107653519
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:114440796 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGGGTCTT CAATTCTATT
  CCATTGAACT ACCTGACTGC CCCAGAGCTC CCAGGGACTT GACCACAAAC AAAAGAGTAC
  ACAAGAATGC CATGGATCCA TGAGGCAGAG GAATTACCTT GTTGGCATCA GTGGGAGGAG
  AGGCCCTTGG GCTTGAGAGT GTTCAAAGCC ATAGAGGAAT GCCATGGATG GAAGATGGGA
  R
  TAGTGGATGG GTGGAGGAGC AACCTTATAG AGGCAGGGTA ATCAGGGATG GAATAGGGTG
  TTTCCAAATA AAGATCTGGA AAGAGGAAAA CAGTTGAAAT ATAAATAAAG AAAATATCCA
  ATGAACAAAA GAAAAGTAGG TACTGAGAAT GCACAATTTT CCTAATCATG TTCATGTAGA
  GGAATTTTGA GAAAGCCATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss138784376	ENSMUSSNP4801767	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss324184717	CHEV_12_115715387	CHEVERUD	SCREENING_POP	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs107653519					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:114440796 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv10-1	immunoglobulin heavy variable 10-1	1831 bp downstream