rs107637956 SNP Detail

Summary

• ID
  rs107637956
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138784517 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACCTGAGCC CAGTCCCCTG
  GCAGAATGTA GAATAAAATA AATGGGATAA TTTAAGTTAT GATCTAGCTA TATGGCCAAT
  GCGTTTGTAA ATATATTTTG AGTCTGAGTT TTATCTCTGG GAGCATGGGA CTGAGAGGAA
  ATACCAGGCC TAAACTTCTC CAGTTATTCA ATAACTAAAT AGAACAACCA GTCTATATTA
  Y
  TTTATTTTAA GAAAAAGTTT CTCTACTGGC TTGAGTGTCG GACTGTGTTC GCTCTTTGTG
  TTCCTAGATG TCCCTGCTTT CAAACAAGGT AAACGACAAG AACAATTGCT TACAATACTC
  GTCATGAACA CAAACAACGA CCAGGAAGAT GTTTCTTAAG TCAAGAGGTC CTCTCAGAAG
  TCAGTTCGAT CCCCCCACTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss135960482	ENSMUSSNP6040010	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs107637956					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138784517 () rs orientation: forward

Symbol	Name	Function Class
Rr586245	regulatory region 586245	535 bp distal
Rr586246	regulatory region 586246	1167 bp proximal