rs107604243 SNP Detail

Summary

• ID
  rs107604243
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:177480137 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A TTTTCTTAAT GGCAGCATGG ATTCAGGTGA GGCTAATGCT
  CAAAGACCAG CCAGGCAAAA ACAGGTTTTG CATTCCACAC ATGCTCTCAT CCATAAGTTT
  A
  TTTCCTGTTC AGTCCCCAGG TTATTTTGAA CAATTTCAAT ATGGACTGGA GATTACAAGT
  CCTACTTAAG ACAGCTAGGA GATATACAAA GCAAAGACCC C                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148363153	ENSMUSSNP581157	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs107604243					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:177480137 () rs orientation: forward

Symbol	Name	Function Class
Gm14325	predicted gene 14325	Intron
Rr374347	regulatory region 374347	1180 bp downstream
Rr572329	regulatory region 572329	1561 bp proximal
Rr572330	regulatory region 572330	1964 bp proximal
Tssr28052	transcription start site region 28052	2000 bp downstream