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D4Mit178 Primer Detail
Primers
  • Name
    D4Mit178
  • Primer 1 Sequence
    GCCCTGAAGGTAAATCAGTAACT
  • Primer 2 Sequence
    GCTCAGGAGGTACATTGCCT
  • ID
    MGI:700519
  • Product Size
    147
  • Other IDs
    D4Mit178 (BROAD)
  • Note
    MIT assay: MT1508
    Additional information: MIT STS Marker Data Files
Genes
D4Mit178 DNA segment, Chr 4, Massachusetts Institute of Technology 178
Polymorphisms
J:40662 Threadgill DW, et al., Mamm Genome. 1997 Jun;8(6):441-2
Endonuclease Gene Allele Fragments Strains
Not Specified D4Mit178 a 170bp 129P2/Ola, 129P3/J, 129T1/Sv-Dnd1Ter, 129X1/Sv, CD-1
b 166bp 129X1/SvJ
J:41370 Neuhaus IM, et al., Mamm Genome. 1997 Jul;8(7):506-9
Endonuclease Gene Allele Fragments Strains
D4Mit178 c 170bp C3HeB/FeJLe
f smaller FVB/N
J:34136 Whitehead Institute at MIT, et al., Database Release. 1999;
Endonuclease Gene Allele Fragments Strains
D4Mit178 a 146bp B6.Cg-Lepob/+, C57BL/6J
b 170bp C3H/HeJ, DBA/2J, NOD/MrkTac
c 172bp AKR/J
d 174bp LP/J
e 176bp A/J, BALB/cJ, NON/ShiLt
f 212bp SPRET/EiJ
g 224bp CAST/EiJ
J:54496 Rogers MJ, et al., Mamm Genome. 1999 May;10(5):513-9
Endonuclease Gene Allele Fragments Strains
D4Mit178 c 0.22kb CAST/EiJ
w 0.16kb STOCK Whrnwi
J:55077 Le Voyer TE, et al., Mamm Genome. 1999 Jun;10(6):542-3
Endonuclease Gene Allele Fragments Strains
D4Mit178 c smaller C58/J
f not given FVB/NJ
i not given I/LnJ
J:57937 Schalkwyk LC, et al., Genome Res. 1999 Sep;9(9):878-87
Endonuclease Gene Allele Fragments Strains
D4Mit178 a 166bp AKR/OlaHsd
b 144bp C57BL/6JOlaHsd, C57BL/10
c 170bp 129P3/J, A/JOlaHsd, BALB/cJ
d 168bp DBA/2J
h 164bp C3H/HeJ
j 176bp JF1
l 180bp SJL/J
p 190bp PWB
J:67963 Iraqi F, MGI Direct Data Submission. 2001;
Endonuclease Gene Allele Fragments Strains
D4Mit178 c 142bp CBA/CaOlaHsd
s 146bp SWR/OlaHsd
J:90435 Golas A, et al., MGI Direct Data Submission. 2004;
Endonuclease Gene Allele Fragments Strains
D4Mit178 c smaller CBA/Kw
e larger KE
References
J:40662 Threadgill DW, et al., SSLPs to map genetic differences between the 129 inbred strains and closed-colony, random-bred CD-1 mice. Mamm Genome. 1997 Jun;8(6):441-2
J:41370 Neuhaus IM, et al., Microsatellite DNA variants between the FVB/N and C3HeB/FeJLe and C57BL/6J mouse strains. Mamm Genome. 1997 Jul;8(7):506-9
J:34136 Whitehead Institute at MIT, et al., Genetic and Physical Maps of the Mouse, Database Release. Database Release. 1999;
J:54496 Rogers MJ, et al., Genetic mapping of the whirler mutation. Mamm Genome. 1999 May;10(5):513-9
J:55077 Le Voyer TE, et al., Microsatellite DNA variants among the FVB/NJ, C58/J, and I/LnJ mouse strains. Mamm Genome. 1999 Jun;10(6):542-3
J:57937 Schalkwyk LC, et al., Panel of microsatellite markers for whole-genome scans and radiation hybrid mapping and a mouse family tree. Genome Res. 1999 Sep;9(9):878-87
J:67963 Iraqi F, Polymorphisms of 513 SSLP microsatellite markers among CBA and SWR. MGI Direct Data Submission. 2001;
J:90435 Golas A, et al., Mapping of mouse Chromosome 4, 10, 12, 13, 15, 16, 17, 18, 19, X, STS markers in CBXE RI strains. MGI Direct Data Submission. 2004;
J:106743 Mouse Genome Informatics and NCBI UniSTS, UniSTS load for MIT markers. Database Download. 2006;

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last database update
05/21/2024
MGI 6.23
The Jackson Laboratory