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Tbr1_riboprobe1 Probe Detail
Nucleotide
Probe/Clone
  • Name
    Tbr1_riboprobe1
  • Sequence Type
    cDNA
  • ID
    MGI:6184829
  • Note
    This probe was generated by the Allen Institute for Brain Science. Copyright 2004 Allen Institute for Brain Science. Allen Mouse Brain Atlas. Available from: http://mouse.brain-map.org/. Copyright 2008 Allen Institute for Brain Science. Allen Developing Mouse Brain Atlas. Available from: http://developingmouse.brain-map.org. The probe was generated using PCR; its predicted amplicon based on the genome assembly at the time is:
    CACTCGCTCTTTCACTTGACCCTCGATGACCGTCTGCGGGGATAAGTGCAGGTCTCTCAC
    TATGATTTTAAAACTCTTCTTTTTTCTTTCTTTCTTTCTCTCTACACAGCCTTCTCTGCA
    GTTAGCGCACCGACCTTGAACCTGGCTGTAAACCTTGTGGTTTTCCAACTTTTCGTCTGT
    GAGGTTATGATCCTCCCTGTCTTTTTTCCACCCCCTTCTCCTTGCCCCACTCATCCTCTC
    CTTTCTCTTGGAATGAAACTCTTCAACTTTAGGAGACCTGGGCAATCCTGCCAGGCAGCA
    GCGATTCCGACCCGCCTTGTCTTGGCCTCCCTATTTAACCATAGGATGTTGACTCTAGAA
    CCTGCACCCACCCAGCGCGTCCTTTCTTATACCCGAGTGGATGGATGGATGGATGGATGG
    ATGGTAGGGATGTTAATACTTTTAGTGGAACAAAGCCTGTGAAATGATTGTATATAGTGT
    TAATTTATTGTAACGAATGGCTAGTTTTTATTCTCATTGTCAAGGCACAAAACCAGTTCA
    CGCTTAACTTTTTATTCCTTTCCTTTCTTCTCCTTTTCTTTTTCTCCTCTCATTCTTTCT
    CTTCTCCCACACCCTTTGTTTTCTTGTGAGTTATTAAAGATATTCTAAGAGGCTCTGGAA
    ACACGAAGCACTTCATAGTGGTGGCTTTCTCACTTCTCAGTTCGTTGCATGATGTAACCA
    CTGTGTGCCCTGGTGCACACAATGTAGCTAAGGAGAATCCACCTGAACACCTGTAAAAGC
    TAGTTGTCTGTTCCTAGGCGAGTCGAGTAAGTGACACGATGCCTGCCAGGCGGACTTAAC
    TGGAGTTCTATGTGTTTCTCCCTTCCTTCTAAATGGAATGGCCCCACATCAGCAATATTA
    TTTTGCCTTATTTGTTTTTCCCCAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCA
    AATATGCTGATAAACTGTTTCTGACTATCTTTTCAGACCCCACTC
  • Synonyms
    RN_110509_01_A01, RP_070129_02_A02, RP_070227_06_C02, RP_070627_01_C02, RP_071204_02_G03, RP_080916_01_E02, RP_090609_01_A11, RP_090623_05_A11, RP_090811_02_A11, RP_100122_02_B04, RP_100202_05_F11, RP_110224_01_A04
Source
  • Species
    mouse, laboratory
Genes
Tbr1 T-box brain transcription factor 1
Expression
  • Assay Results
    10
References
J:262123 Allen Institute for Brain Science, Allen Brain Atlas: mouse riboprobes. Allen Institute. 2004;
J:215487 Thompson CL, et al., A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. Neuron. 2014 Jul 16;83(2):309-23
J:266522 Elsen GE, et al., The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6--> Tbr2--> Tbr1. Front Neurosci. 2018;12:571
J:270210 Loo L, et al., Single-cell transcriptomic analysis of mouse neocortical development. Nat Commun. 2019 Jan 11;10(1):134
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory