About   Help   FAQ
Shh_riboprobe2 Probe Detail
Nucleotide
Probe/Clone
  • Name
    Shh_riboprobe2
  • Sequence Type
    cDNA
  • ID
    MGI:6183261
  • Note
    This probe was generated by the Allen Institute for Brain Science. Copyright 2004 Allen Institute for Brain Science. Allen Mouse Brain Atlas. Available from: http://mouse.brain-map.org/. Copyright 2008 Allen Institute for Brain Science. Allen Developing Mouse Brain Atlas. Available from: http://developingmouse.brain-map.org. The probe was generated using primers ACAGCTCACAAGTCCTCAGGTT and CGTCTCGATCACGTAGAAGACC; its predicted amplicon based on the genome assembly at the time is:
    ACAGCTCACAAGTCCTCAGGTTCCGCGGACGAGATGCTGCTGCTGCTGGCCAGATGTTTT
    CTGGTGATCCTTGCTTCCTCGCTGCTGGTGTGCCCCGGGCTGGCCTGTGGGCCCGGCAGG
    GGGTTTGGAAAGAGGCGGCACCCCAAAAAGCTGACCCCTTTAGCCTACAAGCAGTTTATT
    CCCAACGTAGCCGAGAAGACCCTAGGGGCCAGCGGCAGATATGAAGGGAAGATCACAAGA
    AACTCCGAACGATTTAAGGAACTCACCCCCAATTACAACCCCGACATCATATTTAAGGAT
    GAGGAAAACACGGGAGCAGACCGGCTGATGACTCAGAGGTGCAAAGACAAGTTAAATGCC
    TTGGCCATCTCTGTGATGAACCAGTGGCCTGGAGTGAAGCTGCGAGTGACCGAGGGCTGG
    GATGAGGACGGCCATCATTCAGAGGAGTCTCTACACTATGAGGGTCGAGCAGTGGACATC
    ACCACGTCCGACCGGGACCGCAGCAAGTACGGCATGCTGGCTCGCCTGGCTGTGGAAGCA
    GGTTTCGACTGGGTCTACTATGAATCCAAAGCTCACATCCACTGTTCTGTGAAAGCAGAG
    AACTCCGTGGCGGCCAAATCCGGCGGCTGTTTCCCGGGATCCGCCACCGTGCACCTGGAG
    CAGGGCGGCACCAAGCTGGTGAAGGACTTACGTCCCGGAGACCGCGTGCTGGCGGCTGAC
    GACCAGGGCCGGCTGCTGTACAGCGACTTCCTCACCTTCCTGGACCGCGACGAAGGCGCC
    AAGAAGGTCTTCTACGTGATCGAGAC
  • Synonyms
    RP_071218_02_C02, RP_071218_02_C08, RP_080717_01_A10, RP_080807_05_G12, RP_080916_01_F01, RP_081016_01_C02, RP_081030_03_C02, RP_091201_01_E03, RP_100319_01_A06, RP_110421_04_B06
Source
  • Species
    mouse, laboratory
Genes
Shh sonic hedgehog
Expression
  • Assay Results
    12
References
J:262123 Allen Institute for Brain Science, Allen Brain Atlas: mouse riboprobes. Allen Institute. 2004;
J:215487 Thompson CL, et al., A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. Neuron. 2014 Jul 16;83(2):309-23
J:257654 Memic F, et al., Transcription and Signaling Regulators in Developing Neuronal Subtypes of Mouse and Human Enteric Nervous System. Gastroenterology. 2018 Feb;154(3):624-636
J:325356 Su-Feher L, et al., Single cell enhancer activity distinguishes GABAergic and cholinergic lineages in embryonic mouse basal ganglia. Proc Natl Acad Sci U S A. 2022 Apr 12;119(15):e2108760119
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory