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Pax6_riboprobe5 Probe Detail
Nucleotide
Probe/Clone
  • Name
    Pax6_riboprobe5
  • Sequence Type
    cDNA
  • ID
    MGI:6180109
  • Note
    This probe was generated by the Allen Institute for Brain Science. Copyright 2004 Allen Institute for Brain Science. Allen Mouse Brain Atlas. Available from: http://mouse.brain-map.org/. Copyright 2008 Allen Institute for Brain Science. Allen Developing Mouse Brain Atlas. Available from: http://developingmouse.brain-map.org. The probe was generated using PCR; its predicted amplicon based on the genome assembly at the time is:
    GGGAGTGCCCTTCCATCTTTGCTTGGGAAATCCGAGACAGATTATTATCCGAGGGGGTCT
    GTACCAACGATAACATACCCAGTGTGTCATCAATAAACAGAGTTCTTCGCAACCTGGCTA
    GCGAAAAGCAACAGATGGGCGCAGACGGCATGTATGATAAACTAAGGATGTTGAACGGGC
    AGACCGGAAGCTGGGGCACACGCCCTGGTTGGTATCCCGGGACTTCAGTACCAGGGCAAC
    CCACGCAAGATGGCTGCCAGCAACAGGAAGGAGGGGGAGAGAACACCAACTCCATCAGTT
    CTAACGGAGAAGACTCGGATGAAGCTCAGATGCGACTTCAGCTGAAGCGGAAGCTGCAAA
    GAAATAGAACATCTTTTACCCAAGAGCAGATTGAGGCTCTGGAGAAAGAGTTTGAGAGGA
    CCCATTATCCAGATGTGTTTGCCCGGGAAAGACTAGCAGCCAAAATAGATCTACCTGAAG
    CAAGAATACAGGTATGGTTTTCTAATCGAAGGGCCAAATGGAGAAGAGAAGAGAAACTGA
    GGAACCAGAGAAGACAGGCCAGCAACACTCCTAGTCACATTCCTATCAGCAGCAGCTTCA
    GTACCAGTGTCTACCAGCCAATCCCACAGCCCACCACACCTGTCTCCTCCTTCACATCAG
    GTTCCATGTTGGGCCGAACAGACACCGCCCTCACCAACACGTACAGTGCTTTGCCACCCA
    TGCCCAGCTTCACCATGGCAAACAACCTGCCTATGCAACCCCCAGTCCCCAGTCAGACCT
    CCTCGTACTCGTGCATGCTGCCCACCAGCCCGTCAGTGAATGGGCGGAGTTATGATACCT
    ACACCCCTCCGCACATGCAAACACACATGAACAGTCAGCCCATGG
  • Synonyms
    RP_040507_01_H12, RP_040629_01_A04, RP_040708_01_E04, RP_040803_01_X_G04, RP_040803_01_X_H04, RP_040930_01_X_C05, RP_050927_01_H01, RP_051017_01_A09, RP_071203_04_C07, RP_071204_01_F02, RP_081016_01_A05, RP_081030_03_A05, RP_090609_01_A04, RP_090623_05_A04, RP_090811_01_D11, RP_091102_03_H05, RP_091117_08_F07, RP_091118_02_B07, RP_091118_04_D07, RP_091118_06_F07, RP_110421_02_C06
Source
  • Species
    mouse, laboratory
Genes
Pax6 paired box 6
Expression
  • Assay Results
    10
References
J:262123 Allen Institute for Brain Science, Allen Brain Atlas: mouse riboprobes. Allen Institute. 2004;
J:215487 Thompson CL, et al., A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. Neuron. 2014 Jul 16;83(2):309-23
J:266522 Elsen GE, et al., The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6--> Tbr2--> Tbr1. Front Neurosci. 2018;12:571
J:325356 Su-Feher L, et al., Single cell enhancer activity distinguishes GABAergic and cholinergic lineages in embryonic mouse basal ganglia. Proc Natl Acad Sci U S A. 2022 Apr 12;119(15):e2108760119
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory