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Col9a1_riboprobe Probe Detail
Nucleotide
Probe/Clone
  • Name
    Col9a1_riboprobe
  • Sequence Type
    cDNA
  • ID
    MGI:6170158
  • Note
    This probe was generated by the Allen Institute for Brain Science. Copyright 2004 Allen Institute for Brain Science. Allen Mouse Brain Atlas. Available from: http://mouse.brain-map.org/. Copyright 2008 Allen Institute for Brain Science. Allen Developing Mouse Brain Atlas. Available from: http://developingmouse.brain-map.org. The probe was generated using PCR; its predicted amplicon based on the genome assembly at the time is:
    AGAGGCCAGATTGATGCGGATGGCTTTGCAGTGCTGGGAAAACTTGTGGACAATCCTCAG
    GTTTCTGTTCCTTTTGAACTCCAGTGGATGCTGATTCATTGTGACCCCCTGAGACCCAGG
    AGAGAAACCTGTCATGAGCTGCCAATCAGAATCACAACCAGCCAGACCACTGATGAGAGA
    GGTCCTCCGGGTGAGCAGGGGCCTCCAGGGCCTCCTGGGCCTCCTGGAGTTCCGGGCATA
    GATGGCATTGATGGTGACCGAGGTCCAAAGGGTCCCCCAGGACCTCCGGGTCCTCCTGGA
    GACCCAGGCAAGCCAGGAGCACCAGGCAAGCCAGGCACACCAGGAGCTGATGGATTAACA
    GGACCTGATGGATCCCCTGGCTCTGTTGGACCAAGGGGACAAAAAGGAGAACCTGGTGTA
    CCTGGGTCTCGTGGATTTCCAGGCCGTGGTATTCCAGGACCCCCTGGTCCTCCTGGGACC
    ACAGGACTTCCTGGAGAACTTGGCCGAGTAGGCCCTATTGGAGACCCTGGGAAAAGAGGA
    CCACCTGGCCCTCCTGGACCTCCAGGACCCAGTGGAACAATTGGATTTCATGATGGAGAC
    CCATTGTGCCCCAATTCCTGCCCACCAGGTCGCTCTGGATATCCAGGCCTACCAGGCATG
    AGGGGCCATAAAGGGGCGAAAGGAGAAATCGGCGAGCCAGGAAGACAAGGACACAAGGGT
    GAAGAGGGTGACCAGGGGGAACTGGGAGAAGTTGGCGATCAAGGACCTCCAGGACCTCAG
    GGTCTGAGAGGCATCACTGGCATAGTTGGAGACAAAGGAGAAAAGGGTGCTCGGGGATTT
    GAT
  • Synonyms
    RP_050210_02_B04, RP_050725_03_C10, RP_080122_02_B01
Source
  • Species
    mouse, laboratory
Genes
Col9a1 collagen, type IX, alpha 1
Expression
  • Assay Results
    9
References
J:262123 Allen Institute for Brain Science, Allen Brain Atlas: mouse riboprobes. Allen Institute. 2004;
J:215487 Thompson CL, et al., A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. Neuron. 2014 Jul 16;83(2):309-23
J:307862 Wilkerson BA, et al., Novel cell types and developmental lineages revealed by single-cell RNA-seq analysis of the mouse crista ampullaris. Elife. 2021 May 18;10:e60108
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory