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B65.5PV2 Probe Detail
Nucleotide
Probe/Clone
  • Name
    B65.5PV2
  • Sequence Type
    genomic
  • ID
    MGI:34967
  • Region Covered
    encodes a portion of endogenous provirus and 3' flank sequences
  • Vector Type
    Phage
  • Insert Site
    EcoRI
  • Insert Size
    5.5kb
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL/6By
  • Tissue
    thymus
Genes
H30 histocompatibility 30
Pmv17 polytropic murine leukemia virus 17
Pol1 viral polymerase 1
Pol10 viral polymerase 10
Pol15 viral polymerase 15
Pol16 viral polymerase 16
Pol17 viral polymerase 17
Pol19 viral polymerase 19
Pol20 viral polymerase 20
Pol23 viral polymerase 23
Pol26 viral polymerase 26
Pol27 viral polymerase 27
Pol6 viral polymerase 6
Pol7 viral polymerase 7
Pol8 viral polymerase 8
Pol9 viral polymerase 9
Sequences
M15369 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
Polymorphisms
J:8263 Rossomando A, et al., Immunogenetics. 1986;23(4):233-45
Notes: A 358bp SmaI fragment was isolated and used in Southern analysis.
Endonuclease Gene Allele Fragments Strains
BamHI Pmv17 b 9.4kb C57BL/6By
c absent BALB/c
h absent C3H
BamHI Pol1 c 21.5kb BALB/c
BamHI Pol1 b absent C57BL/6By
BamHI Pol6 b absent C57BL/6By
c ~7.3kb BALB/c
h absent C3H
BamHI Pol7 b ~7.0kb C57BL/6By
c absent BALB/c
h absent C3H
BamHI Pol8 b absent C57BL/6By
c ~6.0kb BALB/c
BamHI Pol9 b absent C57BL/6By
c ~5.0kb BALB/c
BamHI Pol10 b absent C57BL/6By
c ~3.0kb BALB/c
BglII Pol15 b ~19.0kb C57BL/6By
c absent BALB/c
h absent C3H
BglII Pol16 b ~8.0kb C57BL/6By
c absent BALB/c
BglII Pol17 b absent C57BL/6By
c ~9.0kb BALB/c
BglII Pol19 b ~3.0kb C57BL/6By
c absent BALB/c
BglII Pol20 b ~2.0kb C57BL/6By
c absent BALB/c
h absent C3H
PuvII Pol23 b absent C57BL/6By
c ~23.6kb BALB/c
PuvII Pol26 b absent C57BL/6By
c ~3.0kb BALB/c
PuvII Pol27 b absent C57BL/6By
c ~2.8kb BALB/c
References
J:8263 Rossomando A, et al., Viral sequences are associated with many histocompatibility genes. Immunogenetics. 1986;23(4):233-45
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory