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pL9.2 Probe Detail
Nucleotide
Probe/Clone
  • Name
    pL9.2
  • Sequence Type
    genomic
  • ID
    MGI:20775
  • Region Covered
    includes sequence from Htf9a exons 1 and 2, introns 1 and 2; intergenic region; Htf9c exons 1 and 2, introns 1 and 2
  • Parent Clone
    clone L9
  • Child Clones
    A probe, C probe
  • Vector Type
    Plasmid
  • Insert Site
    EcoRI
  • Insert Size
    ~4.0kb
Source
  • Species
    mouse, laboratory
  • Strain
    BALB/c
  • Tissue
    sperm
Genes
Htf9 HpaII tiny fragments locus 9
Trmt2a TRM2 tRNA methyltransferase 2A
Ranbp1 RAN binding protein 1
Sequences
X05830 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
Polymorphisms
J:11408 Bressan A, et al., Gene. 1991 Jul 22;103(2):201-9
Endonuclease Gene Allele Fragments Strains
SphI Ranbp1 b 5.1,3.3kb C57BL/6J
s 11.0,7.0kb M. spretus
SphI Trmt2a b 5.1,3.3kb C57BL/6J
s 11.0,7.0kb M. spretus
References
J:17925 Bird A, et al., A fraction of the mouse genome that is derived from islands of nonmethylated, CpG-rich DNA. Cell. 1985 Jan;40(1):91-9
J:17923 Lavia P, et al., Coincident start sites for divergent transcripts at a randomly selected CpG-rich island of mouse. EMBO J. 1987 Sep;6(9):2773-9
J:11408 Bressan A, et al., Characterization of the opposite-strand genes from the mouse bidirectionally transcribed HTF9 locus. Gene. 1991 Jul 22;103(2):201-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory