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LS3 Probe Detail
Nucleotide
Probe/Clone
  • Name
    LS3
  • Sequence Type
    oligo
  • ID
    MGI:18632
  • Region Covered
    a portion of the coding region (CTTACATCTTTATGGGGCCAGAG)
  • Insert Size
    23bp
Source
  • Species
    mouse, laboratory
  • Strain
    BALB/c
  • Tissue
    pooled
  • Tissue Description
    thymus and B-lymphocytes
Genes
Iapls3-1 intracisternal A particle, lymphocyte specific 3-1
Iapls3-10 intracisternal A particle, lymphocyte specific 3-10
Iapls3-11 intracisternal A particle, lymphocyte specific 3-11
Iapls3-12 intracisternal A particle, lymphocyte specific 3-12
Iapls3-13 intracisternal A particle, lymphocyte specific 3-13
Iapls3-14 intracisternal A particle, lymphocyte specific 3-14
Iapls3-15 intracisternal A particle, lymphocyte specific 3-15
Iapls3-16 intracisternal A particle, lymphocyte specific 3-16
Iapls3-17 intracisternal A particle, lymphocyte specific 3-17
Iapls3-18 intracisternal A particle, lymphocyte specific 3-18
Iapls3-19 intracisternal A particle, lymphocyte specific 3-19
Iapls3-2 intracisternal A particle, lymphocyte specific 3-2
Iapls3-20 intracisternal A particle, lymphocyte specific 3-20
Iapls3-21 intracisternal A particle, lymphocyte specific 3-21
Iapls3-22 intracisternal A particle, lymphocyte specific 3-22
Iapls3-24 intracisternal A particle, lymphocyte specific 3-24
Iapls3-26 intracisternal A particle, lymphocyte specific 3-26
Iapls3-27 intracisternal A particle, lymphocyte specific 3-27
Iapls3-3 intracisternal A particle, lymphocyte specific 3-3
Iapls3-38 intracisternal A particle, lymphocyte specific 3-38
Iapls3-4 intracisternal A particle, lymphocyte specific 3-4
Iapls3-40 intracisternal A particle, lymphocyte specific 3-40
Iapls3-42 intracisternal A particle, lymphocyte specific, probe 3-42
Iapls3-5 intracisternal A particle, lymphocyte specific 3-5
Iapls3-6 intracisternal A particle, lymphocyte specific 3-6
Iapls3-7 intracisternal A particle, lymphocyte specific 3-7
Iapls3-8 intracisternal A particle, lymphocyte specific 3-8
Iapls3-9 intracisternal A particle, lymphocyte specific 3-9
Iapls3-41 intracisternal A particle, lymphocyte specific 3-41
Iapls3-39 intracisternal A particle, lymphocyte specific 3-39
Iapls3-37 intracisternal A particle, lymphocyte specific 3-37
Iapls3-35 intracisternal A particle, lymphocyte specific 3-35
Iapls3-34 intracisternal A particle, lymphocyte specific 3-34
Iapls3-31 intracisternal A particle, lymphocyte specific 3-31
Iapls3-30 intracisternal A particle, lymphocyte specific 3-30
Iapls3-29 intracisternal A particle, lymphocyte specific 3-29
Iapls3-28 intracisternal A particle, lymphocyte specific 3-28
Iapls3-25 intracisternal A particle, lymphocyte specific 3-25
Iapls3-51 intracisternal A particle, lymphocyte specific, probe 3-51
Iapls3-46 intracisternal A particle, lymphocyte specific, probe 3-46
Iapls3-54 intracisternal A particle, lymphocyte specific, probe 3-54
Iapls3-49 intracisternal A particle, lymphocyte specific, probe 3-49
Iapls3-67 intracisternal A particle, lymphocyte specific, probe 3-67
Iapls3-66 intracisternal A particle, lymphocyte specific, probe 3-66
Iapls3-43 intracisternal A particle, lymphocyte specific, probe 3-43
Iapls3-69 intracisternal A particle, lymphocyte specific, probe 3-69
Iapls3-52 intracisternal A particle, lymphocyte specific, probe 3-52
Iapls3-50 intracisternal A particle, lymphocyte specific, probe 3-50
Iapls3-47 intracisternal A particle, lymphocyte specific, probe 3-47
Iapls3-44 intracisternal A particle, lymphocyte specific, probe 3-44
Iapls3-68 intracisternal A particle, lymphocyte specific, probe 3-68
Iapls3-45 intracisternal A particle, lymphocyte specific, probe 3-45
Iapls3-53 intracisternal A particle, lymphocyte specific, probe 3-53
Iapls3-65 intracisternal A particle, lymphocyte specific 3-65
Polymorphisms
J:3879 Lueders KK, et al., Mamm Genome. 1993;4(2):69-77
Notes: The LS3 probe hybridizes to multiple Iapls loci. Alleles are a=presence, b=absence.
Endonuclease Gene Allele Fragments Strains
Not Specified Iapls3-1 a present C57BL/6By, C57BL/6J
b absent BALB/cBy, DBA/2J
Not Specified Iapls3-2 a present C57BL/6J
b absent DBA/2J
Not Specified Iapls3-3 a present C57BL/6J
b absent DBA/2J
Not Specified Iapls3-4 a present C57BL/6J
b absent DBA/2J
Not Specified Iapls3-5 a present C57BL/6By, C57BL/6J
b absent BALB/cBy, DBA/2J
Not Specified Iapls3-6 a present C57BL/6J
b absent DBA/2J
Not Specified Iapls3-7 a present C57BL/6By, C57BL/6J
b absent BALB/cBy, DBA/2J
Not Specified Iapls3-8 a present C57BL/6By, C57BL/6J
b absent BALB/cBy, DBA/2J
Not Specified Iapls3-9 a present C57BL/6By, C57BL/6J
b absent BALB/cBy, DBA/2J
Not Specified Iapls3-10 a present C57BL/6By, C57BL/6J
b absent BALB/cBy, DBA/2J
Not Specified Iapls3-11 a present C57BL/6By, C57BL/6J
b absent BALB/cBy, DBA/2J
Not Specified Iapls3-12 a present C57BL/6By, C57BL/6J
b absent BALB/cBy, DBA/2J
Not Specified Iapls3-13 a present C57BL/6By, C57BL/6J
b absent BALB/cBy, DBA/2J
Not Specified Iapls3-14 a present C57BL/6J
b absent DBA/2J
Not Specified Iapls3-15 a present DBA/2J
b absent C57BL/6J
Not Specified Iapls3-16 a present DBA/2J
b absent C57BL/6J
Not Specified Iapls3-17 a present DBA/2J
b absent C57BL/6J
Not Specified Iapls3-18 a present DBA/2J
b absent C57BL/6J
Not Specified Iapls3-19 a present DBA/2J
b absent C57BL/6J
Not Specified Iapls3-20 a present DBA/2J
b absent C57BL/6J
Not Specified Iapls3-21 a present DBA/2J
b absent C57BL/6J
Not Specified Iapls3-22 a present DBA/2J
b absent C57BL/6J
J:20038 Lueders KK, et al., Mamm Genome. 1994 Aug;5(8):473-8
Endonuclease Gene Allele Fragments Strains
HindIII Iapls3-1 b ~19.0kb C57BL/6J
s absent M. spretus
HindIII Iapls3-2 b ~13.0kb C57BL/6J
s absent M. spretus
HindIII Iapls3-3 b ~12.0kb C57BL/6J
s absent M. spretus
HindIII Iapls3-4 b ~9.5kb C57BL/6J
s absent M. spretus
HindIII Iapls3-5 b ~7.9kb C57BL/6J
s absent M. spretus
HindIII Iapls3-6 b ~6.1kb C57BL/6J
s absent M. spretus
HindIII Iapls3-7 b ~5.9kb C57BL/6J
s absent M. spretus
HindIII Iapls3-9 b ~4.4kb C57BL/6J
s absent M. spretus
HindIII Iapls3-10 b ~2.9kb C57BL/6J
s absent M. spretus
HindIII Iapls3-11 b ~1.8kb C57BL/6J
s absent M. spretus
HindIII Iapls3-12 b ~0.8kb C57BL/6J
s absent M. spretus
HindIII Iapls3-13 b ~0.5kb C57BL/6J
s absent M. spretus
HindIII Iapls3-14 b ~0.4kb C57BL/6J
s absent M. spretus
HindIII Iapls3-24 b ~9.3kb C57BL/6J
s absent M. spretus
HindIII Iapls3-25 b ~5.3kb C57BL/6J
s absent M. spretus
HindIII Iapls3-26 b ~5.2kb C57BL/6J
s absent M. spretus
HindIII Iapls3-27 b ~3.7kb C57BL/6J
s absent M. spretus
HindIII Iapls3-28 b ~3.6kb C57BL/6J
s absent M. spretus
HindIII Iapls3-29 b ~3.3kb C57BL/6J
s absent M. spretus
HindIII Iapls3-30 b ~2.8kb C57BL/6J
s absent M. spretus
HindIII Iapls3-31 b ~2.6kb C57BL/6J
s absent M. spretus
HindIII Iapls3-35 b ~1.6kb C57BL/6J
s absent M. spretus
HindIII Iapls3-37 b ~1.5kb C57BL/6J
s absent M. spretus
HindIII Iapls3-40 b ~0.35kb C57BL/6J
s absent M. spretus
HindIII Iapls3-41 b ~0.2kb C57BL/6J
s absent M. spretus
HindIII Iapls3-42 b ~0.1kb C57BL/6J
s absent M. spretus
J:22798 Lueders KK, Mamm Genome. 1995 Feb;6(2):134-6
Endonuclease Gene Allele Fragments Strains
HindIII Iapls3-2 b ~9.0kb C57BL/6J
d absent C57BLKS/J, DBA/2J
HindIII Iapls3-11 b ~1.6kb C57BL/6J
d absent C57BLKS/J, DBA/2J
HindIII Iapls3-18 b absent C57BL/6J
d ~3.8kb C57BLKS/J, DBA/2J
HindIII Iapls3-19 b absent C57BL/6J
d ~3.0kb C57BLKS/J, DBA/2J
HindIII Iapls3-20 b absent C57BL/6J
d ~1.4kb C57BLKS/J, DBA/2J
HindIII Iapls3-26 b ~4.1kb C57BL/6J, DBA/2J
d absent C57BLKS/J
HindIII Iapls3-38 b ~1.3kb C57BL/6J
d absent C57BLKS/J, DBA/2J
J:24190 Lueders KK, Mouse Genome. 1995;93(1):161-163
Endonuclease Gene Allele Fragments Strains
HindIII Iapls3-1 b present C57BL/6J
h absent C3H/HeJ
HindIII Iapls3-4 b present C57BL/6J
h absent C3H/HeJ
HindIII Iapls3-7 b present C57BL/6J
h absent C3H/HeJ
HindIII Iapls3-8 b present C57BL/6J
h absent C3H/HeJ
HindIII Iapls3-9 b present C57BL/6J
h absent C3H/HeJ
HindIII Iapls3-10 b present C57BL/6J
h absent C3H/HeJ
HindIII Iapls3-11 b present C57BL/6J
h absent C3H/HeJ
HindIII Iapls3-12 b present C57BL/6J
h absent C3H/HeJ
HindIII Iapls3-13 b present C57BL/6J
h absent C3H/HeJ
HindIII Iapls3-14 b present C57BL/6J
h absent C3H/HeJ
HindIII Iapls3-25 b present C57BL/6J
h absent C3H/HeJ
HindIII Iapls3-26 b present C57BL/6J
h absent C3H/HeJ
HindIII Iapls3-35 b present C57BL/6J
h absent C3H/HeJ
HindIII Iapls3-65 b absent C57BL/6J
h present C3H/HeJ
HindIII Iapls3-66 b absent C57BL/6J
h present C3H/HeJ
HindIII Iapls3-67 b absent C57BL/6J
h present C3H/HeJ
HindIII Iapls3-68 b absent C57BL/6J
h present C3H/HeJ
HindIII Iapls3-69 b absent C57BL/6J
h present C3H/HeJ
J:24203 Lueders KK, Electrophoresis. 1995 Feb;16(2):179-85
Endonuclease Gene Allele Fragments Strains
Not Specified Iapls3-1 a absent A/J
b ~18.0kb C57BL/6J
Not Specified Iapls3-4 a absent A/J
b ~9.2kb C57BL/6J
Not Specified Iapls3-5 a absent A/J
b ~6.8kb C57BL/6J
Not Specified Iapls3-7 a absent A/J
b ~5.2kb C57BL/6J
Not Specified Iapls3-8 a absent A/J
b ~4.9kb C57BL/6J
Not Specified Iapls3-9 a absent A/J
b ~4.3kb C57BL/6J
Not Specified Iapls3-10 a absent A/J
b ~2.6kb C57BL/6J
Not Specified Iapls3-11 a absent A/J
b ~1.9kb C57BL/6J
Not Specified Iapls3-12 a absent A/J
b ~1.5kb C57BL/6J
Not Specified Iapls3-14 a absent A/J
b ~1.1kb C57BL/6J
Not Specified Iapls3-25 a absent A/J
b ~4.6kb C57BL/6J
Not Specified Iapls3-43 a ~6.5kb A/J
b absent C57BL/6J
Not Specified Iapls3-44 a ~5.3kb A/J
b absent C57BL/6J
Not Specified Iapls3-45 a ~5.0kb A/J
b absent C57BL/6J
Not Specified Iapls3-46 a absent A/J
b ~4.2kb C57BL/6J
Not Specified Iapls3-47 a ~2.8kb A/J
b absent C57BL/6J
Not Specified Iapls3-49 a ~2.5kb A/J
b absent C57BL/6J
Not Specified Iapls3-50 a ~2.5kb A/J
b absent C57BL/6J
Not Specified Iapls3-51 a absent A/J
b ~2.4kb C57BL/6J
Not Specified Iapls3-52 a ~2.0kb A/J
b absent C57BL/6J
Not Specified Iapls3-53 a ~2.0kb A/J
b absent C57BL/6J
Not Specified Iapls3-54 a ~1.7kb A/J
b absent C57BL/6J
References
J:3879 Lueders KK, et al., Genomic mapping of intracisternal A-particle proviral elements. Mamm Genome. 1993;4(2):69-77
J:20038 Lueders KK, et al., Mapping of mouse intracisternal A-particle proviral markers in an interspecific backcross. Mamm Genome. 1994 Aug;5(8):473-8
J:22798 Lueders KK, Differences in intracisternal A-particle and GLN proviral loci suggest a genetic contribution from a DBA/2-like strain in generation of the C57BL/Ks strain. Mamm Genome. 1995 Feb;6(2):134-6
J:24190 Lueders KK, Mapping of mouse intracisternal A-particle proviral markers in the BXH RI series. Mouse Genome. 1995;93(1):161-163
J:24203 Lueders KK, Multilocus genomic mapping with intracisternal A-particle proviral oligonucleotide probes hybridized to mouse DNA in dried agarose gels. Electrophoresis. 1995 Feb;16(2):179-85
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