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pAR6 Probe Detail
Nucleotide
Probe/Clone
  • Name
    pAR6
  • Sequence Type
    genomic
  • ID
    MGI:17208
  • Parent Clone
    lambda-TgX15AR6
  • Insert Site
    SstI
  • Insert Size
    1.4kb
  • Synonyms
    AR6
Source
  • Species
    mouse, laboratory
Genes
ckr chakragati
D16Ros2 DNA segment, Chr 16, Roswell Park 2
Polymorphisms
J:517 Ratty AK, et al., Mamm Genome. 1992;3(1):5-10
Notes: For this probe two different M.spretus alleles were detected due to variation in the outbred stock used.
Endonuclease Gene Allele Fragments Strains
BamHI D16Ros2 b 13.5kb C57BL/6Ros
s1 7.3kb M. spretus
s2 12.7kb M. spretus
EcoRI D16Ros2 a 8.4,6.8kb C57L/J
b 6.8,2.5,2.0kb AKR/J, C57BL/6J
d 5.4,2.5,2.0kb DBA/2J
J:42070 Smiraglia DJ, et al., Genomics. 1997 Nov 1;45(3):572-9
Endonuclease Gene Allele Fragments Strains
BglII ckr a 10.0kb STOCK ckr
b absent STOCK ckr+
BglII D16Ros2 b 23.0kb C57BL/10Ros-pf
c 6.0kb C3H/HeRos
p 2.0kb PWK
J:42071 Smiraglia DJ, et al., Genomics. 1997 Nov 1;45(3):562-71
Endonuclease Gene Allele Fragments Strains
BglII D16Ros2 b 23.0kb C57BL/10
c 10.0, 23.0kb STOCK ckr
d 6.0, 10.0, 23.0kb STOCK ckr
h 6.0kb C3H
References
J:517 Ratty AK, et al., Genetic mapping of two DNA markers, D16Ros1 and D16Ros2, flanking the mutation site in the chakragati mouse, a transgenic insertional mutant. Mamm Genome. 1992;3(1):5-10
J:42070 Smiraglia DJ, et al., Genetic characterization of the chromosomal rearrangements that accompany the transgene insertion in the chakragati mouse mutant. Genomics. 1997 Nov 1;45(3):572-9
J:42071 Smiraglia DJ, et al., Physical characterization of the chromosomal rearrangements that accompany the transgene insertion in the chakragati mouse mutant. Genomics. 1997 Nov 1;45(3):562-71
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
10/07/2025
MGI 6.24 		The Jackson Laboratory