probe C Probe Detail MGI Mouse MGI:16830

probe C Probe Detail

Name

probe C
Sequence Type

genomic
ID

MGI:16830
Region Covered

encodes sequence ~25 kb 5' of H-2K
Parent Clone

clone 27.2
Insert Site

KpnI
Insert Size

2.6 kb
Synonyms

probe 4

Species

mouse, laboratory
Strain

AKR
Tissue

liver

H2-K1

histocompatibility 2, K1, K region

J:8224 Steinmetz M, et al., Cell. 1986 Mar 28;44(6):895-904

Notes: Probe 4 hybridizes to polymorphic fragments located ~20 kb 5' of H-2K.

Endonuclease	Gene	Allele	Fragments	Strains
BamHI	H2-K1	a	not given	B10.CAS3, CAS3(R0), CAS3(R18)
BamHI	H2-K1	b	not given	C57BL/6, CAS3(R11)
BglI	H2-K1	a	not given	C3H/HeJ, CAS4(R2), CAS4(R5), CAS4(R6)
BglI	H2-K1	b	not given	B10.CAS4
EcoRI	H2-K1	a	not given	A.SW-H2^s/Sn, A.TL-H2^t1
EcoRI	H2-K1	b	not given	A.AL-H2^a1
HincII	H2-K1	a	not given	A.SW-H2^s/Sn, A.TL-H2^t1
HincII	H2-K1	b	not given	A.AL-H2^a1
HincII	H2-K1	a	not given	C3H/HeJ, CAS4(R2), CAS4(R5), CAS4(R6)
HincII	H2-K1	b	not given	B10.CAS4
HindIII	H2-K1	a	not given	A.SW-H2^s/Sn, A.TL-H2^t1
HindIII	H2-K1	b	not given	A.AL-H2^a1
NdeI	H2-K1	a	not given	A.SW-H2^s/Sn, A.TL-H2^t1
NdeI	H2-K1	b	not given	A.AL-H2^a1
NdeI	H2-K1	a	not given	B10.CAS3, CAS3(R0), CAS3(R18)
NdeI	H2-K1	b	not given	C57BL/6, CAS3(R11)
SacI	H2-K1	a	not given	A.SW-H2^s/Sn, A.TL-H2^t1
SacI	H2-K1	b	not given	A.AL-H2^a1
SacI	H2-K1	a	not given	C3H/HeJ, CAS4(R2), CAS4(R5), CAS4(R6)
SacI	H2-K1	b	not given	B10.CAS4
StuI	H2-K1	a	not given	A.SW-H2^s/Sn, A.TL-H2^t1
StuI	H2-K1	b	not given	A.AL-H2^a1

J:15532 Steinmetz M, et al., Tracts of high or low sequence divergence in the mouse major histocompatibility complex. EMBO J. 1984 Dec 1;3(12):2995-3003

J:8224 Steinmetz M, et al., Gene organization and recombinational hotspots in the murine major histocompatibility complex. Cell. 1986 Mar 28;44(6):895-904

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