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p15.4 Probe Detail
Nucleotide
Probe/Clone
  • Name
    p15.4
  • Sequence Type
    genomic
  • ID
    MGI:12299
  • Region Covered
    located 3' to Emv-15 insertion site in 129/Sv-Ay/Aw mice
  • Parent Clone
    lambda-.129-A
  • Vector Type
    Plasmid
  • Insert Site
    EcoRI
  • Insert Size
    1.1 kb
  • Synonyms
    15.4a
Source
  • Species
    mouse, laboratory
  • Strain
    129/Sv-A/A
  • Tissue
    spleen
Genes
Emv15 endogenous ecotropic MuLV 15, A<y>-associated
Polymorphisms
J:8876 Siracusa LD, et al., Genetics. 1987 Sep;117(1):85-92
Notes: Emv-15 is closely linked to agouti and their allelic distribution reflects this.
Endonuclease Gene Allele Fragments Strains
BclI Emv15 a 16.7,7.7kb C3H/HeJ
b 16.7,7.7kb C57BL/6J
c 7.7kb 129/Sv-Ay/Aw, C57BL/6J-Ay/a
EcoRV Emv15 a 24.1kb C3H/HeJ, C57BL/6J
b 24.1,12.2kb 129/Sv-Ay/Aw, C57BL/6J-Ay/a
HindIII Emv15 a 2.4kb 129/Sv-Ay/Aw, C3H/HeJ
b 5.0kb C57BL/6J
KpnI Emv15 a 12,7.5kb 101/Rl, 129/Sv-Ay, 129P3/J, AE/Wf, AEJ/Gn, AG/CamPa, AM/Wf, BALB/cByJ, BALB/cJ, BALB/cWtEiJ, C3H/HeJ, C3H/HeSnJ, C3H/Rl, C3HeB/FeJ, CBA/CaH-T(14;15)6Ca/J, CBA/CaJ, CBA/J, CE/J, HRS/J, IS/CamEi, LP/J, MA/MyJ, PL/J, RIIIS/J, SEA/GnJ, SJL/J, SM/J, SWR/J
b 8.3,7.5kb A/HeJ, A/J, A/WySnJ, AKR/J, AU/SsJ, AX/Pa, BDP/J, BUB/BnJ, C57BL/6ByJ, C57BL/6J, C57BL/6J-Ai, C57BL/6J-Asy, C57BL/6J-at-42J, C57BL/6J-Aw-J/J, C57BL/10J, C57BL/10SnJ, C57BLKS/J, C57BR/cdJ, C57L/J, C58/J, DBA/1J, DBA/2DeJ, DBA/2J, I/LnJ, LG/J, LT/Sv, MOR/Cv, MWT/Le, NZB/BlNJ, P/J, RF/J, SEC/1ReJ, ST/bJ, YBR/Ki
v 12,7.5,8.3kb C57BL/6J-Ay/a, YS/Icr
PstI Emv15 a 3.3,1.4kb 129/Sv-Ay/Aw, C3H/HeJ
b 3.2kb C57BL/6J
c 3.3,3.2kb C57BL/6J-Ay/a
J:8877 Siracusa LD, et al., Genetics. 1987 Sep;117(1):93-100
Endonuclease Gene Allele Fragments Strains
HindIII Emv15 a 2.4kb BALB/cByJ, BALB/cWtEiJ, C3H/HeJ, SJL/J
b 5.0kb C57BL/6By, C57BL/6J, C58/J
KpnI Emv15 b 8.3,7.5kb C57BL/6J
v 12.0,3.1kb B6.Cg-Ay/J
J:9913 Siracusa LD, et al., Genetics. 1989 Jul;122(3):669-79
Endonuclease Gene Allele Fragments Strains
HindIII Emv15 a 2.4kb BALB/cWtEiJ, C3H/HeJ
b 5.0kb C57BL/6J, C58/J
KpnI Emv15 b 8.3,7.5kb C57BL/6J
s ~12,7.5kb M. spretus
J:10663 Eicher EM, et al., Genetics. 1990 Jun;125(2):431-46
Endonuclease Gene Allele Fragments Strains
HindIII Emv15 n 5.0kb NZB
s 2.4kb SM
J:10794 Degen SJ, et al., DNA Cell Biol. 1990 Sep;9(7):487-98
Endonuclease Gene Allele Fragments Strains
PstI Emv15 b 3.2kb C57BL/6Ros
s 3.3kb M. spretus
J:2960 Spence SE, et al., Genomics. 1992 Feb;12(2):403-4
Endonuclease Gene Allele Fragments Strains
HindIII Emv15 a 2.4kb 129.AK-Tbc1d20bs
b 5.0kb MOLF/EiJ
J:3059 Nelson KK, et al., Mamm Genome. 1992;3(10):597-600
Endonuclease Gene Allele Fragments Strains
TaqI Emv15 a 4.1kb AEJ/Gn
s 5.5kb M. spretus
References
J:8876 Siracusa LD, et al., Allelic variation within the Emv-15 locus defines genomic sequences closely linked to the agouti locus on mouse chromosome 2. Genetics. 1987 Sep;117(1):85-92
J:8877 Siracusa LD, et al., Genetic organization of the agouti region of the mouse. Genetics. 1987 Sep;117(1):93-100
J:9913 Siracusa LD, et al., Recombinant inbred strain and interspecific backcross analysis of molecular markers flanking the murine agouti coat color locus. Genetics. 1989 Jul;122(3):669-79
J:10663 Eicher EM, et al., The NXSM recombinant inbred strains of mice: genetic profile for 58 loci including the Mtv proviral loci. Genetics. 1990 Jun;125(2):431-46
J:10794 Degen SJ, et al., Characterization of the cDNA coding for mouse prothrombin and localization of the gene on mouse chromosome 2. DNA Cell Biol. 1990 Sep;9(7):487-98
J:2960 Spence SE, et al., Genetic localization of Hao-1, blind-sterile (bs), and Emv-13 on mouse chromosome 2. Genomics. 1992 Feb;12(2):403-4
J:3059 Nelson KK, et al., Localization of phospholipase C-gamma 1 to mouse chromosome 2. Mamm Genome. 1992;3(10):597-600
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05/07/2024
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