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5' probe Probe Detail
Nucleotide
Probe/Clone
  • Name
    5' probe
  • Sequence Type
    genomic
  • ID
    MGI:11120
  • Region Covered
    encodes 3'-flanking region of the Ly-6C.1 allele
  • Insert Site
    EcoRI/PstI
  • Insert Size
    1 kb
  • Note
    This probe encodes the Ly-6.1C allele.
  • Synonyms
    5C
Source
  • Species
    mouse, laboratory
Genes
Ly6c1 lymphocyte antigen 6 family member C1
Polymorphisms
J:10627 Philbrick WM, et al., EMBO J. 1990 Aug;9(8):2485-92
Notes: A 6.0 kb common band was found in EcoRI digested DNA and a 4.0 kb common band using EcoRI+BamHI.
Endonuclease Gene Allele Fragments Strains
EcoRI Ly6 a 1.6kb BALB/c, NON
b 14kb C57BL/6, NZW
c 5.5kb NOD, NZB, ST
EcoRI/BamH Ly6 a 1.6kb BALB/c, NON
b - C57BL/6, NZW
c 1.3kb NOD, NZB, ST
References
J:10627 Philbrick WM, et al., A recombination event in the 5' flanking region of the Ly-6C gene correlates with impaired expression in the NOD, NZB and ST strains of mice. EMBO J. 1990 Aug;9(8):2485-92
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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09/30/2025
MGI 6.24 		The Jackson Laboratory