About   Help   FAQ
Mammalian Phenotype Ontology Annotations
Query Results - Summary
Symbol
Name
ID
Col2a1
collagen, type II, alpha 1
MGI:88452
27 phenotypes from multigenic genotypes
Export: Excel File
Allelic Composition
Genetic Background
Annotated Term Reference
Bmpr1atm1Bhr/Bmpr1a+
Col2a1tm1.1Ksec/Col2a1+
involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6
abnormal neural tube morphology J:163739
abnormal tail morphology J:163739
enophthalmos J:163739
Bmpr1atm1Bhr/Bmpr1a+
Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6
cyclopia J:163739
microcephaly J:163739
midface hypoplasia J:163739
prenatal lethality, incomplete penetrance J:163739
Col2a1tm1(SOX9)Crm/Col2a1+
129S/Sv-Col2a1tm1(SOX9)Crm
abnormal axial skeleton morphology J:90567
abnormal basicranium morphology J:90567
abnormal cartilage morphology J:90567
abnormal craniofacial bone morphology J:90567
abnormal hyoid bone morphology J:90567
abnormal long bone epiphyseal plate morphology J:90567
abnormal vertebrae morphology J:90567
cleft secondary palate J:90567
decreased body size J:90567
decreased chondrocyte proliferation J:90567
decreased length of long bones J:90567
domed cranium J:90567
neonatal lethality, incomplete penetrance J:90567
radius hypoplasia J:90567
respiratory distress J:90567
short snout J:90567
small thoracic cage J:90567
Col2a1tm1(SOX9)Crm/Col2a1+
Sox9tm1Crm/Sox9+
involves: 129S4/SvJae
abnormal skeleton development J:90567
decreased body size J:90567
neonatal lethality, incomplete penetrance J:90567
Col2a1tm1.1Ksec/Col2a1+
Nodaltm1Rob/Nodal+
involves: 129S/SvEv * 129X1/SvJ * C57BL/6
abnormal head morphology J:163739
Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Nodaltm1Rob/Nodal+
involves: 129S/SvEv * 129X1/SvJ * C57BL/6
abnormal head morphology J:163739
Col2a1tm1Prc/Col2a1+
Col9a1tm1Jae/Col9a1tm1Jae
involves: 129/Sv * 129S2/SvPas
osteoarthritis J:117910

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
04/30/2024
MGI 6.23
The Jackson Laboratory