Col11a1 GO Annotations Graph

GO Annotations Graph

Symbol
Name
ID

Col11a1
collagen, type XI, alpha 1
MGI:88446

GO annotations (Text View) (Tabular View)

A table of the annotations represented in this image is provided below.

Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
Graph generated Fri Mar 10 20:53:16 2023.

Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP: Inferred from experiment
HMP: Inferred from high throughput mutant phenotype
HGI: Inferred from high throughput genetic interaction
HDA: Inferred from high throughput direct assay
HEP: Inferred from high throughput expression pattern
IDA: Inferred from direct assay
IEP: Inferred from expression pattern
IGI: Inferred from genetic interaction
IMP: Inferred from mutant phenotype
IPI: Inferred from physical interaction

Homology:

IAS: Inferred from ancestral sequence
IBA: Inferred from biological aspect of ancestor
IBD: Inferred from biological aspect of descendant
IKR: Inferred from key residues
IMR: Inferred from missing residues
IRD: Inferred from rapid divergence
ISA: Inferred from sequence alignment
ISM: Inferred from sequence model
ISO: Inferred from sequence orthology
ISS: Inferred from sequence or structural similarity

Automated:

IEA: Inferred from electronic annotation
RCA: Reviewed computational analysis

Other:

IC: Inferred by curator
NAS: Non-traceable author statement
ND: No biological data available
TAS: Traceable author statement

Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0005201	extracellular matrix structural constituent	IBA	J:265628
Molecular Function	GO:0030020	extracellular matrix structural constituent conferring tensile strength	RCA	J:265607
Molecular Function	GO:1904399	heparan sulfate binding	ISO	J:155856
Molecular Function	GO:0008201	heparin binding	ISO	J:155856
Molecular Function	GO:0046872	metal ion binding	IEA	J:60000
Cellular Component	GO:0005581	collagen trimer	IDA	J:128357
Cellular Component	GO:0005592	collagen type XI trimer	ISO	J:164563
Cellular Component	GO:0005592	collagen type XI trimer	NAS	J:320087
Cellular Component	GO:0005592	collagen type XI trimer	IBA	J:265628
Cellular Component	GO:0062023	collagen-containing extracellular matrix	ISO	J:155856
Cellular Component	GO:0062023	collagen-containing extracellular matrix	NAS	J:320087
Cellular Component	GO:0062023	collagen-containing extracellular matrix	HDA	J:265607
Cellular Component	GO:0031012	extracellular matrix	IBA	J:265628
Cellular Component	GO:0031012	extracellular matrix	IDA	J:215404
Cellular Component	GO:0031012	extracellular matrix	IDA	J:116643
Cellular Component	GO:0031012	extracellular matrix	IDA	J:215404
Cellular Component	GO:0031012	extracellular matrix	IDA	J:116643
Cellular Component	GO:0031012	extracellular matrix	IDA	J:215404
Cellular Component	GO:0031012	extracellular matrix	IDA	J:116643
Cellular Component	GO:0031012	extracellular matrix	IDA	J:215404
Cellular Component	GO:0005576	extracellular region	IEA	J:60000
Cellular Component	GO:0005615	extracellular space	HDA	J:221550
Cellular Component	GO:0005615	extracellular space	IBA	J:265628
Biological Process	GO:0001502	cartilage condensation	IMP	J:83918
Biological Process	GO:0051216	cartilage development	IMP	J:5198
Biological Process	GO:0051216	cartilage development	IMP	J:5254
Biological Process	GO:0051216	cartilage development	IMP	MGI:MGI:60257
Biological Process	GO:0051216	cartilage development	IMP	J:5198
Biological Process	GO:0051216	cartilage development	IMP	J:5198
Biological Process	GO:0051216	cartilage development	IMP	J:22965
Biological Process	GO:0051216	cartilage development	IMP	J:22965
Biological Process	GO:0051216	cartilage development	IMP	J:5847
Biological Process	GO:0051216	cartilage development	IMP	MGI:MGI:60257
Biological Process	GO:0002063	chondrocyte development	IMP	J:5198
Biological Process	GO:0002063	chondrocyte development	IMP	J:5198
Biological Process	GO:0030199	collagen fibril organization	IGI	J:173502
Biological Process	GO:0030199	collagen fibril organization	IGI	J:116643
Biological Process	GO:0030199	collagen fibril organization	IMP	J:22965
Biological Process	GO:0030199	collagen fibril organization	IMP	J:173502
Biological Process	GO:0030199	collagen fibril organization	IMP	J:116643
Biological Process	GO:0030199	collagen fibril organization	IMP	J:83918
Biological Process	GO:0030199	collagen fibril organization	IMP	J:5254
Biological Process	GO:0030199	collagen fibril organization	IMP	J:116643
Biological Process	GO:0030199	collagen fibril organization	IGI	J:116643
Biological Process	GO:0030199	collagen fibril organization	IMP	J:5198
Biological Process	GO:0030199	collagen fibril organization	IMP	J:128357
Biological Process	GO:0030199	collagen fibril organization	IGI	J:116643
Biological Process	GO:0030199	collagen fibril organization	IMP	J:116643
Biological Process	GO:0030199	collagen fibril organization	IMP	J:128357
Biological Process	GO:0030199	collagen fibril organization	IMP	J:5198
Biological Process	GO:0030199	collagen fibril organization	IMP	J:22965
Biological Process	GO:0050910	detection of mechanical stimulus involved in sensory perception of sound	ISO	J:164563
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	IMP	J:5198
Biological Process	GO:0030198	extracellular matrix organization	IBA	J:265628
Biological Process	GO:0003007	heart morphogenesis	IGI	J:116643
Biological Process	GO:0042472	inner ear morphogenesis	IMP	J:999
Biological Process	GO:0006029	proteoglycan metabolic process	IMP	J:83918
Biological Process	GO:0007605	sensory perception of sound	ISO	J:164563
Biological Process	GO:0048705	skeletal system morphogenesis	IMP	J:22965
Biological Process	GO:0035989	tendon development	IMP	J:173502
Biological Process	GO:0035989	tendon development	IGI	J:173502
Biological Process	GO:0055010	ventricular cardiac muscle tissue morphogenesis	IMP	J:116643
Biological Process	GO:0007601	visual perception	ISO	J:164563

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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