GO Annotations Graph

• Symbol: Ssc5d
• Name: scavenger receptor cysteine rich family, 5 domains
• ID: MGI:3606211

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0050840	extracellular matrix binding	IDA	J:169177
Molecular Function	GO:0050840	extracellular matrix binding	IBA	J:265628
Molecular Function	GO:0001968	fibronectin binding	IDA	J:169177
Molecular Function	GO:0043236	laminin binding	IDA	J:169177
Molecular Function	GO:0005515	protein binding	IPI	J:169177
Molecular Function	GO:0005044	scavenger receptor activity	IDA	J:169177
Cellular Component	GO:0062023	collagen-containing extracellular matrix	IDA	J:169177
Cellular Component	GO:0005737	cytoplasm	IEA	J:60000
Cellular Component	GO:0031012	extracellular matrix	IBA	J:265628
Cellular Component	GO:0005576	extracellular region	IEA	J:60000
Cellular Component	GO:0005576	extracellular region	TAS	Reactome:R-MMU-8878599
Cellular Component	GO:0005615	extracellular space	IDA	J:169177
Cellular Component	GO:0005615	extracellular space	HDA	J:221550
Cellular Component	GO:0005615	extracellular space	IBA	J:265628
Cellular Component	GO:0016020	membrane	IEA	J:72247
Biological Process	GO:0006952	defense response	IBA	J:265628
Biological Process	GO:0006952	defense response	IDA	J:169177
Biological Process	GO:0050829	defense response to Gram-negative bacterium	IDA	J:169177
Biological Process	GO:0050830	defense response to Gram-positive bacterium	IDA	J:169177
Biological Process	GO:0042494	detection of bacterial lipoprotein	IDA	J:169177
Biological Process	GO:0042494	detection of bacterial lipoprotein	IBA	J:265628
Biological Process	GO:0002376	immune system process	IEA	J:60000
Biological Process	GO:0045087	innate immune response	NAS	J:169177
Biological Process	GO:0007275	multicellular organism development	IEA	J:60000
Biological Process	GO:0032717	negative regulation of interleukin-8 production	IDA	J:169177
Biological Process	GO:0032677	regulation of interleukin-8 production	IDA	J:169177