GO Annotations Graph

• Symbol: Ush2a
• Name: usherin
• ID: MGI:1341292

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Wed Mar 2 12:11:24 2016.

Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0005518	collagen binding	IDA	J:87900
Molecular Function	GO:0005518	collagen binding	ISO	J:164563
Molecular Function	GO:0017022	myosin binding	IPI	J:122415
Molecular Function	GO:0005515	protein binding	IPI	J:218667
Molecular Function	GO:0005515	protein binding	IPI	J:186070
Molecular Function	GO:0005515	protein binding	IPI	J:122415
Molecular Function	GO:0042803	protein homodimerization activity	IPI	J:218667
Cellular Component	GO:0016324	apical plasma membrane	IDA	J:118927
Cellular Component	GO:0005604	basement membrane	ISO	J:164563
Cellular Component	GO:0005604	basement membrane	IDA	J:87900
Cellular Component	GO:0042995	cell projection	IEA	J:60000
Cellular Component	GO:0036064	ciliary basal body	IDA	J:132040
Cellular Component	GO:0005737	cytoplasm	ISO	J:164563
Cellular Component	GO:0005576	extracellular region	IEA	J:60000
Cellular Component	GO:0016021	integral component of membrane	IEA	J:60000
Cellular Component	GO:0016020	membrane	IEA	J:60000
Cellular Component	GO:0043025	colocalizes_with neuronal cell body	ISO	J:155856
Cellular Component	GO:1990075	periciliary membrane compartment	IDA	J:171542
Cellular Component	GO:1990075	periciliary membrane compartment	IDA	J:209073
Cellular Component	GO:0032391	colocalizes_with photoreceptor connecting cilium	ISO	J:155856
Cellular Component	GO:0032391	photoreceptor connecting cilium	IDA	J:171542
Cellular Component	GO:0032391	photoreceptor connecting cilium	IDA	J:132040
Cellular Component	GO:0001917	colocalizes_with photoreceptor inner segment	ISO	J:155856
Cellular Component	GO:0001917	photoreceptor inner segment	IDA	J:171542
Cellular Component	GO:0005886	plasma membrane	IEA	J:60000
Cellular Component	GO:0002141	stereocilia ankle link	NAS	J:186070
Cellular Component	GO:0002141	stereocilia ankle link	IDA	J:209073
Cellular Component	GO:0002142	stereocilia ankle link complex	IDA	J:122415
Cellular Component	GO:0032420	stereocilium	ISO	J:155856
Cellular Component	GO:0032421	stereocilium bundle	IDA	J:118927
Cellular Component	GO:0060171	stereocilium membrane	IDA	J:186070
Cellular Component	GO:0045202	synapse	ISO	J:155856
Cellular Component	GO:0043195	colocalizes_with terminal bouton	ISO	J:155856
Cellular Component	GO:1990696	USH2 complex	IDA	J:218667
Biological Process	GO:0045184	establishment of protein localization	IMP	J:209073
Biological Process	GO:0060113	inner ear receptor cell differentiation	IMP	J:118927
Biological Process	GO:0048496	maintenance of organ identity	ISO	J:164563
Biological Process	GO:0045494	photoreceptor cell maintenance	IMP	J:118927
Biological Process	GO:0045494	photoreceptor cell maintenance	ISO	J:164563
Biological Process	GO:0050896	response to stimulus	IEA	J:60000
Biological Process	GO:0050953	sensory perception of light stimulus	ISO	J:164563
Biological Process	GO:0007605	sensory perception of sound	ISO	J:164563
Biological Process	GO:0007601	visual perception	IEA	J:60000

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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