Rr629 Other Genome Feature Detail

Summary

• Symbol
  Rr629
• Name
  regulatory region 629
• Synonyms
  C7-C10

• Feature Type
  enhancer
• IDs
  MGI:8172947
• Cluster Members
  Rr658731, Rr658732, Rr658734 ... (7 members)
• Regulates expression of
  Fgf3, Fgf4, Fgf15 (3 regulated genes)

Location &
Maps

• Sequence Map
  Chr7:144441251-144449797 bp

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI
• chr7:144441251-144449797 (GRCm39)

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  141 from dbSNP Build 142

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Find Mice (IMSR)
  0 strains or lines available

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:361944 Chakraborty S, et al., Deletion of a single CTCF motif at the boundary of a chromatin domain with three FGF genes disrupts gene expression and embryonic development. Dev Cell. 2025 Feb 24;

Rr629 regulates expression of:

Feature	Feature Type	Location	Reference
Fgf3, fibroblast growth factor 3	protein coding gene	Chr7:144392349-144397085 (+)	J:361944
Fgf4, fibroblast growth factor 4	protein coding gene	Chr7:144415123-144418982 (+)	J:361944
Fgf15, fibroblast growth factor 15	protein coding gene	Chr7:144450269-144454690 (+)	J:361944

Rr629 Cluster contains:

More Data for these features

Member	Feature Type	Location
Rr658731, regulatory region 658731	CTCF binding site	Chr7:144441603-144441624
Rr658732, regulatory region 658732	enhancer	Chr7:144442510-144442696
Rr658734, regulatory region 658734	CTCF binding site	Chr7:144444586-144444607
Rr658735, regulatory region 658735	enhancer	Chr7:144447891-144448777
Rr658736, regulatory region 658736	CTCF binding site	Chr7:144447967-144447988
Rr658737, regulatory region 658737	CTCF binding site	Chr7:144448158-144448179
Rr658738, regulatory region 658738	CTCF binding site	Chr7:144449749-144449770