Rr575181 Other Genome Feature Detail

Summary

• Symbol
  Rr575181
• Name
  regulatory region 575181

• Feature Type
  enhancer
• IDs
  MGI:8037313
• Regulates expression of
  Sox2 (1 regulated gene)

Location &
Maps

• Sequence Map
  Chr3:34745770-34746888 bp, . strand

  From Ensembl Reg annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  1

Representative Sequences			Length	Strain/Species
genomic	ENSMUSR3_C5G4G	Ensembl | MGI Sequence Detail	1119	Not Applicable

Other Database
Links

Ensembl Regulatory Feature

ENSMUSR3_C5G4G

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:297972 Iida H, et al., Sox2 gene regulation via the D1 enhancer in embryonic neural tube and neural crest by the combined action of SOX2 and ZIC2. Genes Cells. 2020 Apr;25(4):242-256

Rr575181 regulates expression of:

Feature	Feature Type	Location	Reference
Sox2, SRY (sex determining region Y)-box 2	protein coding gene	Chr3:34704554-34706610 (+)	J:297972