Rr575165 Other Genome Feature Detail

Summary

• Symbol
  Rr575165
• Name
  regulatory region 575165
• Synonyms
  N2

• Feature Type
  enhancer
• IDs
  MGI:8037297
• Regulates expression of
  Sox2 (1 regulated gene)

Location &
Maps

• Sequence Map
  Chr3:34699945-34701126 bp, . strand

  From Ensembl Reg annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  62 from dbSNP Build 142

Sequences &
Gene Models

• All Sequences
  1

Representative Sequences			Length	Strain/Species
genomic	ENSMUSR3_C5FZ6	Ensembl | MGI Sequence Detail	1182	Not Applicable

Other Database
Links

Ensembl Regulatory Feature

ENSMUSR3_C5FZ6

References

• Summaries
  All 3
• Earliest
  J:365767 Uchikawa M, et al., Functional analysis of chicken Sox2 enhancers highlights an array of diverse regulatory elements that are conserved in mammals. Dev Cell. 2003 Apr;4(4):509-19
• Latest
  J:278249 Iwafuchi-Doi M, et al., The Pou5f1/Pou3f-dependent but SoxB-independent regulation of conserved enhancer N2 initiates Sox2 expression during epiblast to neural plate stages in vertebrates. Dev Biol. 2011 Apr 15;352(2):354-66

Rr575165 regulates expression of:

Feature	Feature Type	Location	Reference
Sox2, SRY (sex determining region Y)-box 2	protein coding gene	Chr3:34704554-34706610 (+)	J:365767