Rr380 Other Genome Feature Detail

Summary

• Symbol
  Rr380
• Name
  regulatory region 380
• Synonyms
  hs357, LBI720

• Feature Type
  enhancer
• IDs
  MGI:7438286
• Regulates expression of
  Tcf12, Gm37879, Rr380 (3 regulated genes)
• Regulated by
  Rr380 (1 regulatory region)

Location &
Maps

• Sequence Map
  Chr9:71883250-71884013 bp, . strand

  From VISTA annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI
• J:333416 via VISTA: chr9:71883249-71884012 (GRCm39)

• Genetic Map
  Chromosome 9, Syntenic

Strain
Comparison

• SNPs within 2kb
  67 from dbSNP Build 142

Sequences &
Gene Models

• All Sequences
  1

Representative Sequences			Length	Strain/Species
genomic	hs357	VISTA | MGI Sequence Detail	764	Not Applicable

Other Database
Links

VISTA Enhancer Element

hs357

References

• Summaries
  All 3
• Earliest
  J:333416 Haro E, et al., Lmx1b-targeted cis-regulatory modules involved in limb dorsalization. Development. 2017 Jun 1;144(11):2009-2020

Rr380 regulates expression of:

Feature	Feature Type	Location	Reference
Tcf12, transcription factor 12	protein coding gene	Chr9:71751534-72019611 (-)	J:333416
Gm37879, predicted gene, 37879	unclassified gene	Chr9:71846873-71848867 (-)	J:333416
Rr380, regulatory region 380	enhancer	Chr9:71883250-71884013 (.)	J:333416

Rr380 expression regulated by:

Feature	Feature Type	Location	Reference
Rr380, regulatory region 380	enhancer	Chr9:71883250-71884013 (.)	J:333416