Rr115130 Other Genome Feature Detail

Summary

• Symbol
  Rr115130
• Name
  regulatory region 115130
• Synonyms
  ENSMUSR00000849327, Nkx6-1+140kb

• Feature Type
  enhancer
• IDs
  MGI:7003352
• Regulates expression of
  Nkx6-1 (1 regulated gene)

Location &
Maps

• Sequence Map
  Chr5:101669201-101669800 bp

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI
• chr5:101949957-101951002 (mm9) short transgene insert; table in J:316612 (chr5:101668804-101669849 GRCm39) contains this enhancer

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142

References

• Summaries
  All 2
• Earliest
  J:316612 Peterson KA, et al., Neural-specific Sox2 input and differential Gli-binding affinity provide context and positional information in Shh-directed neural patterning. Genes Dev. 2012 Dec 15;26(24):2802-16

Rr115130 regulates expression of:

Feature	Feature Type	Location	Reference
Nkx6-1, NK6 homeobox 1	protein coding gene	Chr5:101807050-101812577 (-)	J:316612