Rr171 Other Genome Feature Detail

Summary

• Symbol
  Rr171
• Name
  regulatory region 171
• Synonyms
  CNS-25, Il9 CNS-25.1, Il9 CNS-25.2, Il9 E3

• Feature Type
  enhancer
• IDs
  MGI:6861871
• Regulates expression of
  Il9 (1 regulated gene)

Location &
Maps

• Sequence Map
  Chr13:56654647-56655370 bp

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI
• chr13:56654647-56655370 (GRCm39).

• Genetic Map
  Chromosome 13, Syntenic

Strain
Comparison

• SNPs within 2kb
  68 from dbSNP Build 142

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Find Mice (IMSR)
  0 strains or lines available

References

• Summaries
  All 5

  Phenotypes 3
• Earliest
  J:268610 Koh B, et al., A conserved enhancer regulates Il9 expression in multiple lineages. Nat Commun. 2018 Nov 15;9(1):4803
• Latest
  J:303354 Fu Y, et al., STAT5 promotes accessibility and is required for BATF-mediated plasticity at the Il9 locus. Nat Commun. 2020 Sep 28;11(1):4882

Rr171 regulates expression of:

Feature	Feature Type	Location	Reference
Il9, interleukin 9	protein coding gene	Chr13:56627090-56630059 (-)	J:268610