Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  5
• Reference
  J:41357 McAllister KA, et al., Genetic mapping of the Brca2 breast cancer susceptibility gene on mouse chromosome 5. Mamm Genome. 1997 Jul;8(7):540-1
• ID
  MGI:895125

Genes

Gene	Assay Type	Description
D5Mit30	PCR amplified length variant
D5Mit63	PCR amplified length variant
D5Mit51	PCR amplified length variant
D5Mit101	PCR amplified length variant
Pdx1	PCR amplified length variant
Brca2	PCR amplified length variant	Brca2-pA, Brca2-pB
D5Mit122	PCR amplified length variant
D5Mit144	PCR amplified length variant
D5Mit192	PCR amplified length variant
D5Mit286	PCR amplified length variant

Notes

• Reference
  Authors use Ipf1 for locus symbol Pdx1.
• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, sexes unspecified or combined
• Female Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  (CZECHII x C57BLKS/J)F1
• Male Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  C57BLKS/J
• Allele 1
  c from CZECHII
• Allele 2
  b from C57BLKS/J

CROSS Data

MC #mice	D5Mit30	D5Mit63	D5Mit51	D5Mit101	Pdx1	Brca2	D5Mit122	D5Mit144	D5Mit192	D5Mit286
69	c	c	c	c	c	c	c	c	c	c
81	b	b	b	b	b	b	b	b	b	b
2	c	b	b	b	b	b	b	b	b	b
1	c	c	b	b	b	b	b	b	b	b
2	c	c	c	c	b	b	b	b	b	b
2	b	b	c	c	c	c	c	c	c	c
1	b	b	b	b	b	c	c	c	c	c

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D5Mit30	D5Mit63	2	158	1.266	0.889
D5Mit63	D5Mit51	3	158	1.899	1.086
D5Mit51	D5Mit101	0	158	0.000	0.000
D5Mit101	Pdx1	2	158	1.266	0.889
Pdx1	Brca2	1	158	0.633	0.631
Brca2	D5Mit122	0	158	0.000	0.000
D5Mit122	D5Mit144	0	158	0.000	0.000
D5Mit144	D5Mit192	0	158	0.000	0.000
D5Mit192	D5Mit286	0	158	0.000	0.000