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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    2
  • Reference
    J:10536 van der Meer-de Jong R, et al., Location of the gene involving the small eye mutation on mouse chromosome 2 suggests homology with human aniridia 2 (AN2). Genomics. 1990 Jun;7(2):270-5
  • ID
    MGI:47557
Genes
GeneAlleleAssay TypeDescription
Hoxd4 Southern analysis Hoxd4 genomic
Cat Southern analysis Cas1 cDNA1
Pax6 visible phenotype
Fshb Southern analysis pFSH-1.4
Fmn1 Southern analysis Fmn genomic1
B2m Southern analysis B2m genomic5
Bmp2 Southern analysis Bmp2 cDNA1
a visible phenotype
Notes
  • Reference
    Authors use ld and Hox-5.1 for locus symbols Fmn and Hoxd4 respectively.
  • Experiment
    Offspring types indicate alleles inherited from F1 parent.
CROSS
  • Type
    Backcross, female
  • Female Parent
    <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s>
  • Strain
    (C57BL/10Nimr +/Pax6 x M. spretus)F1
  • Male Parent
    <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b>
  • Strain
    C57BL/10Nimr
  • Allele 1
    b from C57BL/10Nimr
  • Allele 2
    s from M. spretus
CROSS Data
MC #mice Hoxd4 Cat Pax6 Fshb Fmn1 B2m Bmp2 a
20 b b b b b b b b
34 s s s s s s s s
5 s b b b b b b b
5 b s s s s s s s
0 s s b b b b b b
2 b b s s s s s s
0 s s s b b b b b
1 b b b s s s s s
4 s s s s b b b b
0 b b b b s s s s
0 s s s s s b b b
0 b b b b b s s s
1 s s s s s s b b
1 b b b b b b s s
5 s s s s s s s b
5 b b b b b b b s
4 s s b s s s s s
3 b b s b b b b b
1 b b s b b s s s
1 b b s b b b s s
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
Hoxd4 Cat 10 92 10.870 3.245
Cat Pax6 11 92 11.957 3.383
Pax6 Fshb 10 92 10.870 3.245
Fshb Fmn1 4 92 4.348 2.126
Fmn1 B2m 1 92 1.087 1.081
B2m Bmp2 3 92 3.261 1.852
Bmp2 a 10 92 10.870 3.245

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory