Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  9
• Reference
  J:33931 Pecker I, et al., Identification and chromosomal localization of Atm, the mouse homolog of the ataxia-telangiectasia gene. Genomics. 1996 Jul 1;35(1):39-45
• ID
  MGI:47446

Genes

Gene	Assay Type	Description
Kcnj5	reported elsewhere
Thy1	reported elsewhere
Cbl	reported elsewhere
Cd3g	reported elsewhere
Drd2	reported elsewhere
Acat1	Southern analysis	Acat1 cDNA2
Atm	Southern analysis	REF3
Csk	Southern analysis	Csk cDNA2

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  Copeland-Jenkins
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Kcnj5	Thy1	Cbl	Cd3g	Drd2	Acat1	Atm	Csk
42	b	b	b	b	b	b	b	b
40	s	s	s	s	s	s	s	s
2	s	b	b	b	b	b	b	b
1	b	s	s	s	s	s	s	s
0	s	s	b	b	b	b	b	b
0	b	b	s	s	s	s	s	s
0	s	s	s	b	b	b	b	b
0	b	b	b	s	s	s	s	s
0	s	s	s	s	b	b	b	b
1	b	b	b	b	s	s	s	s
1	s	s	s	s	s	b	b	b
3	b	b	b	b	b	s	s	s
0	s	s	s	s	s	s	b	b
0	b	b	b	b	b	b	s	s
0	s	s	s	s	s	s	s	b
1	b	b	b	b	b	b	b	s

Additional Mice Typed Only for Specific Pairs of Loci

Marker 1	Marker 2	# Recombinants	# Parentals
Kcnj5	Thy1	0	69
Thy1	Cbl	0	32
Cbl	Cd3g	0	34
Cd3g	Drd2	1	71
Drd2	Acat1	2	78
Acat1	Atm	0	79
Atm	Csk	1	89

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Kcnj5	Thy1	3	160	1.875	1.072
Thy1	Cbl	0	123	0.000	0.000
Cbl	Cd3g	0	125	0.000	0.000
Cd3g	Drd2	2	163	1.227	0.862
Drd2	Acat1	6	171	3.509	1.407
Acat1	Atm	0	170	0.000	0.000
Atm	Csk	2	181	1.105	0.777