Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  19
• Reference
  J:31800 Rusiniak ME, et al., Molecular markers near the mouse brachymorphic (bm) gene, which affects connective tissues and bleeding time. Mamm Genome. 1996 Feb;7(2):98-102
• ID
  MGI:46769

Genes

Gene	Assay Type	Description
D19Mit31	PCR amplified length variant	B547
D19Mit28	PCR amplified length variant	B728
D19Mit41	PCR amplified length variant	MPC192
D19Mit16	PCR amplified length variant	A748
D19Mit14	PCR amplified length variant	A637
D19Mit40	PCR amplified length variant	MPC996
D19Mit30	PCR amplified length variant	B532
D19Mit99	PCR amplified length variant	MT5238
D19Mit86	PCR amplified length variant	MT3841
D19Mit47	PCR amplified length variant	MT373
D19Mit98	PCR amplified length variant	MT4560
D19Mit57	PCR amplified length variant	MT766
D19Mit13	PCR amplified length variant	A871
Papss2	visible phenotype
D19Mit64	PCR amplified length variant	MPC1411
D19Mit46	PCR amplified length variant	MMH224
D19Mit81	PCR amplified length variant	MT3508
D19Mit87	PCR amplified length variant	MMH269
D19Mit5	PCR amplified length variant	A75

Notes

• Experiment
  The haplotype distributions for maternal and parental chromosomes have been combined. allele symbol p designates parentals.Offspring types indicate alleles inherited from F1 parent.
  F1 direction known.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a>
• Strain
  (B6C3FeF1-Papss2 Hps1 Hps6/Papss2 Hps1 Hps6 x PWK)F1
• Male Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  B6C3FeF1-Papss2 Hps1 Hps6/Papss2 Hps1 Hps6
• Allele 1
  b from B6C3FeF1-Papss2 Hps1 Hps6/Papss2 Hps1 Hps6
• Allele 2
  a from PWK

CROSS Data

MC #mice	D19Mit31	D19Mit28	D19Mit41	D19Mit16	D19Mit14	D19Mit40	D19Mit30	D19Mit99	D19Mit86	D19Mit47	D19Mit98	D19Mit57	D19Mit13	Papss2	D19Mit64	D19Mit46	D19Mit81	D19Mit87	D19Mit5
1068	p	p	p	p	p	p	p	p	p	p	p	p	p	p	p	p	p	p	p
3	a	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b
1	a	.	.	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b
13	a	.	.	.	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b
1	a	.	.	.	.	.	b	b	b	b	b	b	b	b	b	b	b	b	b
1	a	a	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b
1	a	a	a	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b
1	a	a	a	a	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b
22	a	a	a	a	a	b	b	b	b	b	b	b	b	b	b	b	b	b	b
2	a	a	a	a	a	a	b	b	b	b	b	b	b	b	b	b	b	b	b
4	a	a	a	a	a	a	a	b	b	b	b	b	b	b	b	b	b	b	b
16	a	a	a	a	a	a	a	a	a	b	b	b	b	b	b	b	b	b	b
9	a	a	a	a	a	a	a	a	a	a	b	b	b	b	b	b	b	b	b
9	a	a	a	a	a	a	a	a	a	a	a	b	b	b	b	b	b	b	b
25	a	a	a	a	a	a	a	a	a	a	a	a	b	b	b	b	b	b	b
5	a	a	a	a	a	a	a	a	a	a	a	a	a	a	b	b	b	b	b
8	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	b	b	b	b
2	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	b	b	b
4	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	b	b
1	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	b
1	b	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	a	b	b

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D19Mit31	D19Mit28	4	1182	0.338	0.169
D19Mit28	D19Mit41	1	1182	0.085	0.085
D19Mit41	D19Mit16	1	1182	0.085	0.085
D19Mit16	D19Mit14	1	1183	0.085	0.084
D19Mit14	D19Mit40	22	1196	1.839	0.389
D19Mit40	D19Mit30	2	1196	0.167	0.118
D19Mit30	D19Mit99	4	1197	0.334	0.167
D19Mit99	D19Mit86	0	1197	0.000	0.000
D19Mit86	D19Mit47	16	1197	1.337	0.332
D19Mit47	D19Mit98	9	1197	0.752	0.250
D19Mit98	D19Mit57	9	1197	0.752	0.250
D19Mit57	D19Mit13	25	1197	2.089	0.413
D19Mit13	Papss2	0	1197	0.000	0.000
Papss2	D19Mit64	5	1197	0.418	0.186
D19Mit64	D19Mit46	8	1197	0.668	0.236
D19Mit46	D19Mit81	2	1197	0.167	0.118
D19Mit81	D19Mit87	5	1197	0.418	0.186
D19Mit87	D19Mit5	1	1197	0.084	0.084