Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  7
• Reference
  J:32893 Johnson KR, et al., Mapping of the ARIX homeodomain gene to mouse chromosome 7 and human chromosome 11q13. Genomics. 1996 May 1;33(3):527-31
• ID
  MGI:46662

Genes

Gene	Assay Type	Description
Hmgn1-rs2	reported elsewhere
n-TUtca2	reported elsewhere
Rps16-rs7	reported elsewhere
Gpi1	reported elsewhere
Rps4-rs10	reported elsewhere
Hmgn2-rs19	reported elsewhere
Rpl18-rs7	reported elsewhere
Tpi-rs3	reported elsewhere
Rps17-rs6	reported elsewhere
Rps4-rs2	reported elsewhere
Rps8-rs5	reported elsewhere
Hmgn2-rs17	reported elsewhere
Phox2a	Southern analysis	Arix cDNA1
Hbb	reported elsewhere
Rpl36a-rs5	reported elsewhere
Hmgn1-rs7	reported elsewhere
Rpl32-rs17	reported elsewhere
Rpl25-rs3	reported elsewhere
Rpl19-rs5	reported elsewhere
Rps16-rs4	reported elsewhere
Hmgn1-rs10	reported elsewhere
Rplp2-rs3	reported elsewhere

Notes

• Reference
  Data deposited with MGD under accession numbers MGD-CREX-403 and MGD-CREX-404.

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  (C57BL/6J x CAST/Ei)F1
• Male Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  JAX Mouse Mutant Resource BCB
• Allele 1
  b from C57BL/6J
• Allele 2
  c from CAST/EiJ

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
Hmgn1-rs2	n-TUtca2	6	136
n-TUtca2	Rps16-rs7	8	117
Rps16-rs7	Gpi1	2	123
Rps16-rs7	Rps4-rs10	2	123
Gpi1	Rps4-rs10	0	140
Gpi1	Hmgn2-rs19	9	127
Gpi1	Rpl18-rs7	9	127
Rps4-rs10	Hmgn2-rs19	9	127
Rps4-rs10	Rpl18-rs7	9	127
Hmgn2-rs19	Rpl18-rs7	0	136
Hmgn2-rs19	Tpi-rs3	8	132
Rpl18-rs7	Tpi-rs3	8	132
Tpi-rs3	Rps17-rs6	28	114
Rps17-rs6	Rps4-rs2	1	115
Rps4-rs2	Rps8-rs5	4	112
Rps8-rs5	Hmgn2-rs17	4	93
Hmgn2-rs17	Phox2a	3	92
Hmgn2-rs17	Hbb	3	92
Hmgn2-rs17	Rpl36a-rs5	3	92
Phox2a	Hbb	0	135
Hbb	Rpl36a-rs5	0	121
Phox2a	Hmgn1-rs7	8	113
Hbb	Hmgn1-rs7	8	113
Rpl36a-rs5	Hmgn1-rs7	8	113
Hmgn1-rs7	Rpl32-rs17	1	134
Rpl32-rs17	Rpl25-rs3	2	132
Rpl32-rs17	Rpl19-rs5	2	132
Rpl25-rs3	Rps16-rs4	3	107
Rpl19-rs5	Rps16-rs4	3	107
Rps16-rs4	Hmgn1-rs10	12	109
Hmgn1-rs10	Rplp2-rs3	2	137

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Hmgn1-rs2	n-TUtca2	6	142	4.225	1.688
n-TUtca2	Rps16-rs7	8	125	6.400	2.189
Rps16-rs7	Gpi1	2	125	1.600	1.122
Rps16-rs7	Rps4-rs10	2	125	1.600	1.122
Gpi1	Rps4-rs10	0	140	0.000	0.000
Gpi1	Hmgn2-rs19	9	136	6.618	2.132
Gpi1	Rpl18-rs7	9	136	6.618	2.132
Rps4-rs10	Hmgn2-rs19	9	136	6.618	2.132
Rps4-rs10	Rpl18-rs7	9	136	6.618	2.132
Hmgn2-rs19	Rpl18-rs7	0	136	0.000	0.000
Hmgn2-rs19	Tpi-rs3	8	140	5.714	1.962
Rpl18-rs7	Tpi-rs3	8	140	5.714	1.962
Tpi-rs3	Rps17-rs6	28	142	19.718	3.339
Rps17-rs6	Rps4-rs2	1	116	0.862	0.858
Rps4-rs2	Rps8-rs5	4	116	3.448	1.694
Rps8-rs5	Hmgn2-rs17	4	97	4.124	2.019
Hmgn2-rs17	Phox2a	3	95	3.158	1.794
Hmgn2-rs17	Hbb	3	95	3.158	1.794
Hmgn2-rs17	Rpl36a-rs5	3	95	3.158	1.794
Phox2a	Hbb	0	135	0.000	0.000
Hbb	Rpl36a-rs5	0	121	0.000	0.000
Phox2a	Hmgn1-rs7	8	121	6.612	2.259
Hbb	Hmgn1-rs7	8	121	6.612	2.259
Rpl36a-rs5	Hmgn1-rs7	8	121	6.612	2.259
Hmgn1-rs7	Rpl32-rs17	1	135	0.741	0.738
Rpl32-rs17	Rpl25-rs3	2	134	1.493	1.047
Rpl32-rs17	Rpl19-rs5	2	134	1.493	1.047
Rpl25-rs3	Rps16-rs4	3	110	2.727	1.553
Rpl19-rs5	Rps16-rs4	3	110	2.727	1.553
Rps16-rs4	Hmgn1-rs10	12	121	9.917	2.717
Hmgn1-rs10	Rplp2-rs3	2	139	1.439	1.010