Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  6
• Reference
  J:31555 Stassen AP, et al., Genetic composition of the recombinant congenic strains. Mamm Genome. 1996 Jan;7(1):55-8
• ID
  MGI:46491

Genes

Gene	Assay Type
D6Mit50	PCR amplified length variant
D6Mit158	PCR amplified length variant
D6Mit51	PCR amplified length variant
D6Mit48	PCR amplified length variant
D6Mit173	PCR amplified length variant
D6Mit42	PCR amplified length variant
D6Mit122	PCR amplified length variant
D6Mit6	PCR amplified length variant
D6Mit22	PCR amplified length variant
D6Mit9	PCR amplified length variant
D6Mit29	PCR amplified length variant
D6Mit31	PCR amplified length variant
D6Mit177	PCR amplified length variant
D6Mit165	PCR amplified length variant
D6Mit35	PCR amplified length variant
D6Mit10	PCR amplified length variant
D6Mit23	PCR amplified length variant
D6Mit109	PCR amplified length variant
D6Mit52	PCR amplified length variant
D6Mit61	PCR amplified length variant
D6Mit110	PCR amplified length variant
D6Mit13	PCR amplified length variant
D6Mit25	PCR amplified length variant
D6Mit58	PCR amplified length variant
D6Mit59	PCR amplified length variant
D6Mit14	PCR amplified length variant
D6Mit15	PCR amplified length variant
Hoxa3	PCR amplified length variant

Notes

• Reference
  D3Mit371 mapped on Chromosome 3 in this reference has since been withdrawn to equal D5Mit123 on Chromosome 5.

RI

• Origin
  BALB/cHeA x STS/A
• Designation
  CcS
• Abbreviation 1
  C
• Abbreviation 2
  S

RI Data (columns show RI Lines sampled)

Marker	1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20
D6Mit50	C	S	S	C	C	C	C	C	C	C	C	C	S	C	C	S	C	C	C	C
D6Mit158	C	S	S	C	C	C	S	C	C	C	C	C	S	C	C	S	C	C	C	C
D6Mit51	C	S	.	C	C	C	S	C	C	C	C	C	.	C	C	S	C	C	C	C
D6Mit48	C	S	S	C	C	C	S	C	C	C	C	C	S	C	C	S	X	C	C	C
D6Mit173	C	S	S	C	S	C	C	C	C	C	C	C	S	C	C	S	C	C	C	C
D6Mit42	C	S	S	C	C	C	C	C	S	C	C	C	S	C	C	C	S	C	C	C
D6Mit122	S	.	C	S	S	.	C	.	S	S	C	S	S	.	C	S	S	.	S	C
D6Mit6	C	S	Z	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
D6Mit22	C	S	C	C	.	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
D6Mit9	C	S	Z	C	C	.	C	C	C	C	C	C	C	C	C	C	C	C	C	C
D6Mit29	C	S	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
D6Mit31	C	S	C	C	C	C	C	C	C	S	C	C	C	C	C	C	C	C	C	C
D6Mit177	C	S	C	C	.	C	C	C	C	S	C	C	C	C	X	C	C	C	C	C
D6Mit165	C	S	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
D6Mit35	C	C	C	C	S	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
D6Mit10	.	.	C	C	S	C	C	C	C	C	C	.	C	C	C	C	C	C	C	Z
D6Mit23	C	C	C	C	S	C	C	C	C	C	C	C	C	C	C	C	C	C	C	S
D6Mit109	C	C	C	S	C	C	C	S	C	C	C	C	C	C	S	C	C	S	C	C
D6Mit52	S	C	C	C	C	C	C	.	C	C	C	C	C	C	C	C	C	C	C	S
D6Mit61	S	C	C	.	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	S
D6Mit110	S	C	C	C	C	.	C	.	C	.	C	.	C	.	C	.	.	.	.	.
D6Mit13	S	C	Z	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	Z
D6Mit25	S	.	.	C	C	C	C	C	C	C	.	C	.	C	C	C	C	C	C	.
D6Mit58	S	S	S	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	.	.
D6Mit59	S	S	S	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
D6Mit14	S	S	S	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
D6Mit15	S	.	S	.	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
Hoxa3	C	S	Z	C	C	C	C	C	S	C	C	C	S	C	C	S	C	C	C	C

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D6Mit50	D6Mit158	1	20	1.351	1.424
D6Mit158	D6Mit51	0	18	0.000	0.000
D6Mit51	D6Mit48	1	18	1.515	1.606
D6Mit48	D6Mit173	3	20	4.839	3.323
D6Mit173	D6Mit42	4	20	7.143	4.563
D6Mit42	D6Mit122	8	15	66.667	80.508
D6Mit122	D6Mit6	11	15	-183.333	285.450
D6Mit6	D6Mit22	1	19	1.429	1.510
D6Mit22	D6Mit9	1	18	1.515	1.606
D6Mit9	D6Mit29	1	19	1.429	1.510
D6Mit29	D6Mit31	1	20	1.351	1.424
D6Mit31	D6Mit177	1	19	1.429	1.510
D6Mit177	D6Mit165	2	19	3.125	2.482
D6Mit165	D6Mit35	2	20	2.941	2.321
D6Mit35	D6Mit10	1	17	1.613	1.716
D6Mit10	D6Mit23	1	17	1.613	1.716
D6Mit23	D6Mit109	6	20	13.636	8.469
D6Mit109	D6Mit52	5	19	10.870	6.894
D6Mit52	D6Mit61	0	18	0.000	0.000
D6Mit61	D6Mit110	0	9	0.000	0.000
D6Mit110	D6Mit13	1	10	2.941	3.283
D6Mit13	D6Mit25	0	15	0.000	0.000
D6Mit25	D6Mit58	0	14	0.000	0.000
D6Mit58	D6Mit59	0	18	0.000	0.000
D6Mit59	D6Mit14	0	20	0.000	0.000
D6Mit14	D6Mit15	0	18	0.000	0.000
D6Mit15	Hoxa3	5	18	11.905	7.756