Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  6
• Reference
  J:11577 Walther C, et al., Pax: a murine multigene family of paired box-containing genes. Genomics. 1991 Oct;11(2):424-34
• ID
  MGI:46106

Genes

Gene	Assay Type	Description
Hoxa4	reported elsewhere
Pax4	Southern analysis	gHIIpbx
D6Pas5	reported elsewhere

Notes

• Reference
  Authors use Hox-4, Hox-1.4 and c-jun for locus symbols Hoxd, Hoxa4 and Jun respectively. Summary haplotype data indicates 3 recombinants between Pax3 and Ctla4 whereas Table 2 indicates 5 recombinants between these two loci. Summary haplotype data indicates 1 recombinant between Pax5 and Etl2 whereas Table 2 indicates 2 recombinants between these two loci.
• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b>/<s> <s> <s>
• Strain
  (C57BL/6 x SPE/Pas)F1
• Male Parent
  <b> <b> <b>/<b> <b> <b>
• Strain
  C57BL/6
• Allele 1
  b from C57BL/6
• Allele 2
  s from SPE/Pas

CROSS Data

MC #mice	Hoxa4	Pax4	D6Pas5
7	b	b	b
5	s	s	s
1	s	b	b
1	b	s	s
0	s	s	b
1	b	b	s
0	.	b	b
4	.	s	s
6	b	.	b
11	s	.	s
4	b	b	.
3	s	s	.
3	s	.	b
1	b	.	s

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Hoxa4	Pax4	2	22	9.091	6.129
Pax4	D6Pas5	1	19	5.263	5.123