Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  13
• Reference
  J:29377 Servadio A, et al., Mapping of the Sca1 and pcd genes on mouse chromosome 13 provides evidence that they are different genes. Genomics. 1995 Oct 10;29(3):812-3
• ID
  MGI:45783

Genes

Gene	Assay Type	Description
D13Mit3	PCR amplified length variant	M79
Atxn1	Southern analysis	C208-1.1, M6
D13Mit13	PCR amplified length variant	D24
Agtpbp1	reported elsewhere
D13Mit8	PCR amplified length variant	M61
D13Mit9	PCR amplified length variant	M147

Notes

• Reference
  This data has been submitted to MGD with the accession number MGD-CREX-240.
• Experiment
  Only pcd/pcd animals are typed in this cross. An additional pcd/pcd animal was heterozygous for all markers. The authors suggest it may have been a mis-classified heterozygous pcd.Offspring types indicate alleles inherited from F1 parent.
  F1 direction known.
  

CROSS

• Type
  Backcross, sexes unspecified or combined
• Female Parent
  <b> <b> <b> <b> <b> <b>/<h> <h> <h> <h> <h> <h>
• Strain
  (C57BL/6J-Agtpbp1 x CAST/Ei)F1
• Male Parent
  <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b>
• Strain
  C57BL/6J-+ /Agtpbp1
• Allele 1
  b from C57BL/6J-+ /Agtpbp1
• Allele 2
  h from CAST/EiJ

CROSS Data

MC #mice	D13Mit3	Atxn1	D13Mit13	Agtpbp1	D13Mit8	D13Mit9
87	b	b	b	b	b	b
12	h	b	b	b	b	b
4	h	h	b	b	b	b
5	h	h	h	b	b	b
8	b	b	b	b	h	h

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D13Mit3	Atxn1	12	116	10.345	2.828
Atxn1	D13Mit13	4	116	3.448	1.694
D13Mit13	Agtpbp1	5	116	4.310	1.886
Agtpbp1	D13Mit8	8	116	6.897	2.353
D13Mit8	D13Mit9	0	116	0.000	0.000