Mapping Data

Experiment

• Experiment
  TEXT-Genetic Cross
• Chromosome
  6
• Reference
  J:29406 Davies PO, et al., An anchored molecular map of mouse chromosome 6 with an analysis of interference. Mamm Genome. 1995 Oct;6(10):738-40
• ID
  MGI:45645

Genes

Gene	Assay Type	Description
D6Mit1	PCR amplified length variant	A10
Wnt2	PCR amplified length variant
D6Mit48	PCR amplified length variant	P94
Pax4	PCR amplified length variant
Tcrb	PCR amplified length variant
D6Nds4	PCR amplified length variant	T59
D6Mit17	PCR amplified length variant	B302
Cd8a	PCR amplified length variant
Cd8b1	PCR amplified length variant
D6Mit21	PCR amplified length variant	B308
D6Mit53	PCR amplified length variant	B504
D6Mit11	PCR amplified length variant	M170
D6Mit55	PCR amplified length variant	B606
Cd4	PCR amplified length variant
D6Mit25	PCR amplified length variant	A1121
D6Mit14	PCR amplified length variant	M190

Notes

• Reference
  Data from this paper have been submitted with MGD under accession numbers MGD-CREX-234 and MGD-CREX-236.
• Experiment
  Haplotypes of 191 backcross (NOD x PWK/Pas)F1 x NOD mice and 68 F2 (NOD x PWK/Pas)F1 x (NOD x PWK/Pas)F1 were combined to order loci on mouse Chromosome 6. In addition the authors demonstrated that map positions for various loci derived independently from an intercross and from a backcross can be combined using the CRI-MAP program. The order of loci is as follows: D6Mit1 - 0.9 cM - Wnt2 - 6.6 cM - D6Mit48 - 0.3 cM - Pax4 - 5.3 cM - Tcrb - 0.9 cM - D6Nds4 - 8.5 cM - D6Mit17 - 0.6 cM - Cd8a - 0.6 cM -Cd8b - 5.0 cM - D6Mit21 - 8.9 cM - D6Mit53 - 6.5 cM - D6Mit11 - 1.2 cM - D6Mit55 - 4.1 cM - Cd4 - 5.9 cM - D6Mit25 - 5.2 cM - D6Mit14.