Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  8
• Reference
  J:28009 Cross JC, et al., Hxt encodes a basic helix-loop-helix transcription factor that regulates trophoblast cell development. Development. 1995 Aug;121(8):2513-23
• ID
  MGI:45495

Genes

Gene	Assay Type	Description
Msr1	reported elsewhere
Hand2	Southern analysis	Hxt/Hed genomic
Lpl	Southern analysis	Lpl probe
Jund	reported elsewhere
Ucp1	reported elsewhere

Notes

• Reference
  Authors use Jund for locus symbol Jund1.
• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  Copeland-Jenkins
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Msr1	Hand2	Lpl	Jund	Ucp1
26	b	b	b	b	b
24	s	s	s	s	s
3	s	b	b	b	b
3	b	s	s	s	s
1	s	s	b	b	b
0	b	b	s	s	s
0	s	s	s	b	b
0	b	b	b	s	s
2	s	s	s	s	b
1	b	b	b	b	s

Additional Mice Typed Only for Specific Pairs of Loci

Marker 1	Marker 2	# Recombinants	# Parentals
Msr1	Hand2	9	84
Hand2	Lpl	4	90
Hand2	Jund	4	90
Lpl	Jund	0	94
Lpl	Ucp1	3	56
Jund	Ucp1	3	56

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Msr1	Hand2	15	153	9.804	2.404
Hand2	Lpl	5	154	3.247	1.428
Lpl	Jund	0	154	0.000	0.000
Jund	Ucp1	6	119	5.042	2.006