Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  5
• Reference
  J:27719 Urosevic N, et al., Low resolution mapping around the flavivirus resistance locus (Flv) on mouse chromosome 5. Mamm Genome. 1995 Jul;6(7):454-8
• ID
  MGI:45455

Genes

Gene	Allele	Assay Type	Description
Spp1		reported elsewhere
Pde6b	Pde6b^rd1	reported elsewhere
D5Mit158		PCR amplified length variant	MT540
D5Mit188		PCR amplified length variant	MT1573
D5Mit68		PCR amplified length variant	MPC588
Oas1b		resistance/susceptibility
D5Mit159		PCR amplified length variant	MT935
D5Mit242		PCR amplified length variant	MT2421
D5Mit118		PCR amplified length variant	MPC2518
D5Mit65		PCR amplified length variant	B560
D5Mit95		PCR amplified length variant	MPC1471
D5Mit96		PCR amplified length variant	MPC1558
D5Mit160		PCR amplified length variant	MT579
D5Mit138		PCR amplified length variant	MT143

Notes

• Reference
  Authors use Eta-1 for locus symbol Ric.
• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, sexes unspecified or combined
• Female Parent
  <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  (C3H/HeJ x C3.RV)F1
• Male Parent
  <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h>/<h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h>
• Strain
  C3H/HeJ
• Allele 1
  h from C3H/HeJ
• Allele 2
  c from C3.RV

CROSS Data

MC #mice	Spp1	Pde6b	D5Mit158	D5Mit188	D5Mit68	Oas1b	D5Mit159	D5Mit242	D5Mit118	D5Mit65	D5Mit95	D5Mit96	D5Mit160	D5Mit138
67	c	c	c	.	.	c	.	.	.	c	.	.	.	c
73	h	h	h	.	.	h	.	.	.	h	.	.	.	h
1	c	c	c	c	c	c	c	c	c	h	h	h	h	h
1	h	h	h	h	h	h	h	h	h	c	c	c	c	c
1	c	c	c	c	c	c	c	c	h	h	h	h	h	h
0	h	h	h	h	h	h	h	h	c	c	c	c	c	c
0	c	c	c	c	c	h	h	h	h	h	h	h	h	h
1	h	h	h	h	h	c	c	c	c	c	c	c	c	c
0	c	c	c	c	h	h	h	h	h	h	h	h	h	h
1	h	h	h	h	c	c	c	c	c	c	c	c	c	c
0	c	c	c	h	h	h	h	h	h	h	h	h	h	h
2	h	h	h	c	c	c	c	c	c	c	c	c	c	c
6	c	c	h	h	h	h	h	h	h	h	h	h	h	h
6	h	h	c	c	c	c	c	c	c	c	c	c	c	c
1	c	h	h	h	h	h	h	h	h	h	h	h	h	h
1	h	c	c	c	c	c	c	c	c	c	c	c	c	c

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Spp1	Pde6b	2	161	1.242	0.873
Pde6b	D5Mit158	12	161	7.453	2.070