Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  1
• Reference
  J:25243 Mullick A, et al., High-resolution linkage map in the vicinity of the Lp locus. Genomics. 1995 Apr 10;26(3):479-88
• ID
  MGI:45117

Genes

Gene	Assay Type	Description
D1Mit42	PCR amplified length variant	A664
D1Mit63	PCR amplified length variant	B742
D1Mit110	PCR amplified length variant	MPC179
Atp1b1	Southern analysis	19G
D1Mit15	PCR amplified length variant	M146
D1Hun14	SSCP
D1Mit111	PCR amplified length variant	MPC1603
D1Mit36	PCR amplified length variant	B327
D1Mit148	PCR amplified length variant	D921
D1Mit146	PCR amplified length variant	MPC2238
D1Mit205	PCR amplified length variant	MMH289
Fcgr2b	Southern analysis	Fcgr2 cDNA1
Mpz	Southern analysis	Mpp cDNA1
Vangl2	visible phenotype
D1Mit149	PCR amplified length variant	MPC1817
D1Mit115	PCR amplified length variant	MPC514
D1Mit62	PCR amplified length variant	B737
D1Mit17	PCR amplified length variant	M41

Notes

• Reference
  Authors use Cd3h which been withdrawn to equal Cd3z.
• Experiment
  Only Lp mice were analyzed.Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, sexes unspecified or combined
• Female Parent
  <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (LPT/Le Vangl2/+ x SJL/J)F1
• Male Parent
  <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  SJL/J
• Allele 1
  l from LPT/LeJ
• Allele 2
  s from SJL/J

CROSS Data

MC #mice	D1Mit42	D1Mit63	D1Mit110	Atp1b1	D1Mit15	D1Hun14	D1Mit111	D1Mit36	D1Mit148	D1Mit146	D1Mit205	Fcgr2b	Mpz	Vangl2	D1Mit149	D1Mit115	D1Mit62	D1Mit17
411	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l
8	s	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l
2	s	s	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l
3	s	s	s	s	l	l	l	l	l	l	l	l	l	l	l	l	l	l
1	s	s	s	s	s	s	l	l	l	l	l	l	l	l	l	l	l	l
4	s	s	s	s	s	s	s	s	s	s	s	s	s	l	l	l	l	l
7	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	s	s	s
3	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	.	s
4	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	s

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D1Mit42	D1Mit63	8	443	1.806	0.633
D1Mit63	D1Mit110	2	443	0.451	0.319
D1Mit110	Atp1b1	0	443	0.000	0.000
Atp1b1	D1Mit15	3	443	0.677	0.390
D1Mit15	D1Hun14	0	443	0.000	0.000
D1Hun14	D1Mit111	1	443	0.226	0.225
D1Mit111	D1Mit36	0	443	0.000	0.000
D1Mit36	D1Mit148	0	443	0.000	0.000
D1Mit148	D1Mit146	0	443	0.000	0.000
D1Mit146	D1Mit205	0	443	0.000	0.000
D1Mit205	Fcgr2b	0	443	0.000	0.000
Fcgr2b	Mpz	0	443	0.000	0.000
Mpz	Vangl2	4	443	0.903	0.449
Vangl2	D1Mit149	0	443	0.000	0.000
D1Mit149	D1Mit115	7	443	1.580	0.592
D1Mit115	D1Mit62	0	440	0.000	0.000
D1Mit62	D1Mit17	4	440	0.909	0.452